RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 OPA1O60313 960 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 POP7O75817 140 aaKnown RBP10.92□□□□□ -0.66
LIG1-211ENST00000596457 TMEM63AO94886 807 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 DKK1O94907 266 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 EML2O95834 649 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 GPR89BP0CG08 455 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 JUPP14923 745 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 RPL10P27635 214 aaKnown RBP10.92□□□□□ -0.66
LIG1-211ENST00000596457 E2F1Q01094 437 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 PTK6Q13882 451 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 LRP8Q14114 963 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 GPR33Q49SQ1 333 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 FASTKD1Q53R41 847 aaKnown RBP10.92□□□□□ -0.66
LIG1-211ENST00000596457 HES3Q5TGS1 186 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 IZUMO3Q5VZ72 239 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 OGFOD3Q6PK18 319 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 ZNF534Q76KX8 674 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 NLRP9Q7RTR0 991 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 JAMLQ86YT9 394 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 PPIL6Q8IXY8 311 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 NAGSQ8N159 534 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 MPP5Q8N3R9 675 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 ARL14Q8N4G2 192 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 OTUD6BQ8N6M0 293 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 GPR156Q8NFN8 814 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 OR13J1Q8NGT2 312 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 OR4L1Q8NH43 312 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 NAT6Q93015 286 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.92□□□□□ -0.66
LIG1-211ENST00000596457 RUNDC3BQ96NL0 473 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 COPS8Q99627 209 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 TMEM121BQ9BXQ6 578 aaPredicted RBP10.92□□□□□ -0.66
LIG1-211ENST00000596457 IL22Q9GZX6 179 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 ZDHHC3Q9NYG2 299 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 SAMD15Q9P1V8 674 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 TBC1D29Q9UFV1 150 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 RABGEF1Q9UJ41 708 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 ANAPC5Q9UJX4 755 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 RNF215Q9Y6U7 377 aa10.92□□□□□ -0.66
LIG1-211ENST00000596457 ARID1BQ8NFD5 2236 aaPredicted RBP10.92□□□□□ -0.66
LIG1-211ENST00000596457 C1QTNF9BB2RNN3 333 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 H7C0S8 307 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 AGRPO00253 132 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 MT-CO3P00414 261 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 C1QTNF9P0C862 333 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 ATP1B2P14415 290 aaPredicted RBP10.91□□□□□ -0.66
LIG1-211ENST00000596457 VCLP18206 1134 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 IDSP22304 550 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 ACRV1P26436 265 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 ALDH4A1P30038 563 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 FOXN2P32314 431 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 DRG2P55039 364 aaKnown RBP10.91□□□□□ -0.66
LIG1-211ENST00000596457 CCL7P80098 99 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 B4GALNT1Q00973 533 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 INSM1Q01101 510 aaPredicted RBP10.91□□□□□ -0.66
LIG1-211ENST00000596457 ILKQ13418 452 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 HLTFQ14527 1009 aaKnown RBP eCLIP10.91□□□□□ -0.66
LIG1-211ENST00000596457 DBN1Q16643 649 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 AMZ1Q400G9 498 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 AFTPHQ6ULP2 937 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 TMPRSS7Q7RTY8 843 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 PCGF5Q86SE9 256 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 LDB1Q86U70 411 aaPredicted RBP10.91□□□□□ -0.66
LIG1-211ENST00000596457 CAND1Q86VP6 1230 aaKnown RBP10.91□□□□□ -0.66
LIG1-211ENST00000596457 AMZ2Q86W34 360 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 ZNF761Q86XN6 746 aaPredicted RBP10.91□□□□□ -0.66
LIG1-211ENST00000596457 ZNF547Q8IVP9 402 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 PIANPQ8IYJ0 282 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 NAT8LQ8N9F0 302 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 OR6C4Q8NGE1 309 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 MFSD3Q96ES6 412 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 TIMM29Q9BSF4 260 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 SMOXQ9NWM0 555 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 PSMD13Q9UNM6 376 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 MAD1L1Q9Y6D9 718 aa10.91□□□□□ -0.66
LIG1-211ENST00000596457 ARHGEF17Q96PE2 2063 aaPredicted RBP10.91□□□□□ -0.66
LIG1-211ENST00000596457 SDR42E2A6NKP2 422 aa10.9□□□□□ -0.66
LIG1-211ENST00000596457 EFCAB8A8MWE9 144 aa10.9□□□□□ -0.66
LIG1-211ENST00000596457 GOLGA8KD6RF30 607 aa10.9□□□□□ -0.66
LIG1-211ENST00000596457 GOLGA8TH3BQL2 631 aa10.9□□□□□ -0.66
LIG1-211ENST00000596457 BANF1O75531 89 aa10.9□□□□□ -0.66
LIG1-211ENST00000596457 RPLP0P05388 317 aaKnown RBP10.9□□□□□ -0.66
LIG1-211ENST00000596457 POLBP06746 335 aa10.9□□□□□ -0.66
LIG1-211ENST00000596457 GP1BAP07359 652 aa10.9□□□□□ -0.66
LIG1-211ENST00000596457 SLC2A4P14672 509 aa10.9□□□□□ -0.66
LIG1-211ENST00000596457 GLB1P16278 677 aa10.9□□□□□ -0.66
LIG1-211ENST00000596457 MAGEA6P43360 314 aa10.9□□□□□ -0.66
LIG1-211ENST00000596457 MAPK9P45984 424 aa10.9□□□□□ -0.66
LIG1-211ENST00000596457 OR1D5P58170 312 aa10.9□□□□□ -0.66
LIG1-211ENST00000596457 DHX34Q14147 1143 aaKnown RBP10.9□□□□□ -0.66
LIG1-211ENST00000596457 NFE2L1Q14494 772 aa10.9□□□□□ -0.66
LIG1-211ENST00000596457 RNASEH2BQ5TBB1 312 aaKnown RBP10.9□□□□□ -0.66
LIG1-211ENST00000596457 CCNI2Q6ZMN8 369 aaPredicted RBP10.9□□□□□ -0.66
LIG1-211ENST00000596457 SYDE1Q6ZW31 735 aaPredicted RBP10.9□□□□□ -0.66
LIG1-211ENST00000596457 C11orf96Q7Z7L8 435 aa10.9□□□□□ -0.66
LIG1-211ENST00000596457 TRIM48Q8IWZ4 208 aa10.9□□□□□ -0.66
LIG1-211ENST00000596457 CFAP206Q8IYR0 622 aa10.9□□□□□ -0.66
LIG1-211ENST00000596457 MCUQ8NE86 351 aa10.9□□□□□ -0.66
LIG1-211ENST00000596457 SPATA4Q8NEY3 305 aa10.9□□□□□ -0.66
LIG1-211ENST00000596457 SLC37A2Q8TED4 501 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms