RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 POLR1BQ9H9Y6 1135 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 RDH14Q9HBH5 336 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 SARS2Q9NP81 518 aaKnown RBP10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 ASCL3Q9NQ33 180 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 EIF2B3Q9NR50 452 aaKnown RBP10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 ZNF624Q9P2J8 865 aaPredicted RBP10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 SNX12Q9UMY4 172 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 SATB2Q9UPW6 733 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 RAXQ9Y2V3 346 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 NEU2Q9Y3R4 380 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 AK5Q9Y6K8 562 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 ATMQ13315 3056 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 IGLV3-16A0A075B6K0 115 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 KIR2DS5A0A0G2JLQ3 304 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 PRAMEF33A0A0G2JMD5 474 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 A0A0G2JNG1 304 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 TCRBV7S3A2A0A539 114 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 OR51F1A6NGY5 319 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 E7EVH7 732 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 KIR2DS3K7RE56 304 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 PGRMC1O00264 195 aaKnown RBP10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 KIF5CO60282 957 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 POP7O75817 140 aaKnown RBP10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 DXOO77932 396 aaKnown RBP10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 ITGALP20701 1170 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 RPL10P27635 214 aaKnown RBP10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 AKT1P31749 480 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 CCKBRP32239 447 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 ACTN2P35609 894 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 SLC19A1P41440 591 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 LSSP48449 732 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 DRG2P55039 364 aaKnown RBP10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 INHBCP55103 352 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 HHEXQ03014 270 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 DMPKQ09013 629 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 GTF2H3Q13889 308 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 KIR2DS5Q14953 304 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 TRIP13Q15645 432 aaPredicted RBP10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 SEPT7Q16181 437 aaKnown RBP10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 CYP1B1Q16678 543 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 AMZ1Q400G9 498 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 FNBP1LQ5T0N5 605 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 AGAP9Q5VTM2 703 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 TMEM220Q6QAJ8 160 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 ABRAXAS1Q6UWZ7 409 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 PPP1R21Q6ZMI0 780 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 USP53Q70EK8 1073 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 DET1Q7L5Y6 550 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 GSTA5Q7RTV2 222 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 DNAAF3Q8N9W5 541 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 ACTRT1Q8TDG2 376 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 STYXQ8WUJ0 223 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 ANP32BQ92688 251 aaKnown RBP10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 GRAMD1AQ96CP6 724 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 SGF29Q96ES7 293 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 TTC25Q96NG3 672 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 RANBP9Q96S59 729 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 ZCCHC2Q9C0B9 1178 aaKnown RBP10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 HOMER3Q9NSC5 361 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 TMEM9Q9P0T7 183 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 CPNE7Q9UBL6 633 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 SLC2A6Q9UGQ3 507 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 CRLS1Q9UJA2 301 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 WDR37Q9Y2I8 494 aa10.8□□□□□ -0.68
SHKBP1-206ENST00000595523 CCDC187A0A096LP49 1063 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 HEATR9A2RTY3 570 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 CCDC162PA2VCL2 907 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 OR52A4PA6NMU1 304 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 KRT37O76014 449 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 CPNE6O95741 557 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 HOXB3P14651 431 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 XRCC1P18887 633 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 MSH3P20585 1137 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 ACRV1P26436 265 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 FOXN2P32314 431 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 COILP38432 576 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 LMAN1P49257 510 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 BASP1P80723 227 aaKnown RBP10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 ACVR1Q04771 509 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 SQSTM1Q13501 440 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 NFE2L1Q14494 772 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 KCNJ11Q14654 390 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 GSE1Q14687 1217 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 CLCA4Q14CN2 919 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 TBC1D25Q3MII6 688 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 MAP9Q49MG5 647 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 GPR33Q49SQ1 333 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 ZNF658BQ4V348 819 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 BCL7AQ4VC05 210 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 TSTD2Q5T7W7 516 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 IGF2-ASQ6U949 168 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 WASH2PQ6VEQ5 465 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 SLC9B2Q86UD5 537 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 AMZ2Q86W34 360 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 SERPINA9Q86WD7 417 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 LILRA3Q8N6C8 439 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 ULK4Q96C45 1275 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 ZNF514Q96K75 400 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 COPS8Q99627 209 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 EPB41L5Q9HCM4 733 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms