RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 MAML1Q92585 1016 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 TSACCQ96A04 125 aaPredicted RBP12.76□□□□□ -0.37
SCAF1-202ENST00000595242 HAPLN3Q96S86 360 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 FERMT1Q9BQL6 677 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 DHRS4Q9BTZ2 278 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 CCDC134Q9H6E4 229 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 ACSS3Q9H6R3 686 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 WDCPQ9H6R7 721 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 PRDM8Q9NQV8 689 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 RAB6BQ9NRW1 208 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 LRIT1Q9P2V4 623 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 NEU3Q9UQ49 428 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 ITM2BQ9Y287 266 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 MFHAS1Q9Y4C4 1052 aa12.76□□□□□ -0.37
SCAF1-202ENST00000595242 CELSR1Q9NYQ6 3014 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 SYNJ2BP-COX16A0A087WUM0 186 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 EXOC1LA0A1B0GW35 172 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 SMIM23A6NLE4 172 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 EFCAB7A8K855 629 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 K7EM74 188 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 TOR1BO14657 336 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 CREB3O43889 395 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 SLC2A3P11169 496 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 MLNP12872 115 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 SERPINB6P35237 376 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 ABL2P42684 1182 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 PPIDQ08752 370 aaKnown RBP12.75□□□□□ -0.37
SCAF1-202ENST00000595242 ARHGEF7Q14155 803 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 ZSCAN26Q16670 478 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 ALG11Q2TAA5 492 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 KLHL38Q2WGJ6 581 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 ANKRD20A2Q5SQ80 823 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 ARTNQ5T4W7 220 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 ANKRD20A1Q5TYW2 823 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 ANKRD20A3Q5VUR7 823 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 ZNF534Q76KX8 674 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 PIM3Q86V86 326 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 EFCAB3Q8N7B9 438 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 FBXO36Q8NEA4 188 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 CCDC110Q8TBZ0 833 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 ARHGEF2Q92974 986 aaKnown RBP12.75□□□□□ -0.37
SCAF1-202ENST00000595242 RAB7BQ96AH8 199 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 HDAC11Q96DB2 347 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 HEPHQ9BQS7 1158 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 TKTL2Q9H0I9 626 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 ZNF768Q9H5H4 540 aaKnown RBP12.75□□□□□ -0.37
SCAF1-202ENST00000595242 GPN2Q9H9Y4 310 aaPredicted RBP12.75□□□□□ -0.37
SCAF1-202ENST00000595242 ETNK1Q9HBU6 452 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 XAB2Q9HCS7 855 aaKnown RBP12.75□□□□□ -0.37
SCAF1-202ENST00000595242 MBNL1Q9NR56 388 aaKnown RBP12.75□□□□□ -0.37
SCAF1-202ENST00000595242 COX16Q9P0S2 106 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 SENP1Q9P0U3 644 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 B3GALT1Q9Y5Z6 326 aa12.75□□□□□ -0.37
SCAF1-202ENST00000595242 ADGRG4Q8IZF6 3080 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 A0A0D9SEW6 157 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 GOLGA8MH3BSY2 632 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 HGSO14964 777 aaPredicted RBP12.74□□□□□ -0.37
SCAF1-202ENST00000595242 RAD1O60671 282 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 STK10O94804 968 aaKnown RBP12.74□□□□□ -0.37
SCAF1-202ENST00000595242 RASGRP1O95267 797 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 MAP3K6O95382 1288 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 METTL18O95568 372 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 CPNE6O95741 557 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 RHOCP08134 193 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 CCR1P32246 355 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 SLC18A1P54219 525 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 CDH4P55283 916 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 GALNT2Q10471 571 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 BBS9Q3SYG4 887 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 ENPP7Q6UWV6 458 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 B4GALNT4Q76KP1 1039 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 CAND1Q86VP6 1230 aaKnown RBP12.74□□□□□ -0.37
SCAF1-202ENST00000595242 SFTPA2Q8IWL1 248 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 VPS37BQ9H9H4 285 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 CTNNAL1Q9UBT7 734 aa12.74□□□□□ -0.37
SCAF1-202ENST00000595242 APCP25054 2843 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 C16orf96A6NNT2 1141 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 TTLL8A6PVC2 850 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 FGF10O15520 208 aaPredicted RBP12.73□□□□□ -0.37
SCAF1-202ENST00000595242 NUDT21O43809 227 aaKnown RBP12.73□□□□□ -0.37
SCAF1-202ENST00000595242 BANF1O75531 89 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 FAM155BO75949 473 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 TM7SF2O76062 418 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 LRIG2O94898 1065 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 CLDN1O95832 211 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 DDAH2O95865 285 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 C1QAP02745 245 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 CHN1P15882 459 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 MX2P20592 715 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 ELK3P41970 407 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 CCNHP51946 323 aaPredicted RBP12.73□□□□□ -0.37
SCAF1-202ENST00000595242 GEMIN4P57678 1058 aaKnown RBP12.73□□□□□ -0.37
SCAF1-202ENST00000595242 B4GALNT1Q00973 533 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 WASHC5Q12768 1159 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 PARP6Q2NL67 630 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 AMZ1Q400G9 498 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 C5orf22Q49AR2 442 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 C14orf28Q4W4Y0 310 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 ALFQ53S48 1182 aa12.73□□□□□ -0.37
SCAF1-202ENST00000595242 CARD16Q5EG05 197 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms