RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 FGGP02679 453 aa18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 ITGA2BP08514 1039 aa18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 RPL10P27635 214 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 CXCR5P32302 372 aa18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 SLC19A1P41440 591 aa18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 LIMK2P53671 638 aa18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 PCBP4P57723 403 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 GPLD1P80108 840 aa18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 CCDC173Q0VFZ6 552 aa18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 C16orf72Q14CZ0 275 aa18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 PHF19Q5T6S3 580 aa18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 AGAP9Q5VTM2 703 aa18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 DRICH1Q6PGQ1 229 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 OR4D9Q8NGE8 314 aa18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 NAT14Q8WUY8 206 aa18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 CCDC97Q96F63 343 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 CRELD1Q96HD1 420 aa18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 DNAJC1Q96KC8 554 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 ZCCHC2Q9C0B9 1178 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 TMEM9Q9P0T7 183 aa18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 LHX6Q9UPM6 363 aa18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 DRG1Q9Y295 367 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 LOXL2Q9Y4K0 774 aa18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 DNMT3AQ9Y6K1 912 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-202ENST00000593764 MROH6A6NGR9 719 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 OR2AG2A6NM03 316 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 AGRPO00253 132 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 SGTAO43765 313 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 KCNJ13O60928 360 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 SUN1O94901 812 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 ZSCAN5DPP0CG00 497 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 PSMA3P25788 255 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 FDFT1P37268 417 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 HADHAP40939 763 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 DRG2P55039 364 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 DMPKQ09013 629 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 POU6F1Q14863 301 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 SEPT7Q16181 437 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 FAM83HQ6ZRV2 1179 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 AMZ2Q86W34 360 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 SPACA3Q8IXA5 215 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 RCBTB1Q8NDN9 531 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 ZNF248Q8NDW4 579 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 OR52K1Q8NGK4 314 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 TMEM159Q96B96 161 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 SH3KBP1Q96B97 665 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 SGF29Q96ES7 293 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 NAF1Q96HR8 494 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 FAM96AQ9H5X1 160 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 NLE1Q9NVX2 485 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 PDP2Q9P2J9 529 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 WDR37Q9Y2I8 494 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 ZKSCAN5Q9Y2L8 839 aa18.17■□□□□ 0.5
SHKBP1-202ENST00000593764 PRAMEF33A0A0G2JMD5 474 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 ERI2A8K979 691 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 PDZK1P1A8MUH7 402 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 H7C0S8 307 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 CEP104O60308 925 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 ITIH1P19827 911 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 MSH3P20585 1137 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 IDSP22304 550 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 MPSTP25325 297 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 AKT1P31749 480 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 RPL22P35268 128 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 ETV5P41161 510 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 GRIA1P42261 906 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 ABCG1P45844 678 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 CDKN1CP49918 316 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 EPHA4P54764 986 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 TLE3Q04726 772 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 SEMA5AQ13591 1074 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 CLCA4Q14CN2 919 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 LONRF2Q1L5Z9 754 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 FNBP1LQ5T0N5 605 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 TMEM71Q6P5X7 295 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 XKR5Q6UX68 686 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 LRRC69Q6ZNQ3 347 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 DET1Q7L5Y6 550 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 SNX20Q7Z614 316 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 LINC00523Q86TU6 105 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 REXO1L1PQ8IX06 675 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 NXPE1Q8N323 547 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 BEND7Q8N7W2 519 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 AVL9Q8NBF6 648 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 OR10G6Q8NH81 332 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 STYXQ8WUJ0 223 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 CDKN2AIPNLQ96HQ2 116 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 CCDC74BQ96LY2 380 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 CMKLR1Q99788 373 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 DPYSL5Q9BPU6 564 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 TBC1D10AQ9BXI6 508 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 KCNF1Q9H3M0 494 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 STN1Q9H668 368 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 UCK1Q9HA47 277 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 RAB6BQ9NRW1 208 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 PCDHGA7Q9Y5G6 932 aa18.16■□□□□ 0.5
SHKBP1-202ENST00000593764 MGAQ8IWI9 3026 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 TRBV5-4A0A0C4DH59 114 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 LILRA5A6NI73 299 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 OR52A4PA6NMU1 304 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms