RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 DKK1O94907 266 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 SNRPAP09012 282 aaKnown RBP11.78□□□□□ -0.52
DDX39A-219ENST00000592927 KRT15P19012 456 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 CD38P28907 300 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 GP5P40197 560 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 HADHAP40939 763 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 ARCN1P48444 511 aaKnown RBP11.78□□□□□ -0.52
DDX39A-219ENST00000592927 CSE1LP55060 971 aaKnown RBP11.78□□□□□ -0.52
DDX39A-219ENST00000592927 MAGOHP61326 146 aaKnown RBP11.78□□□□□ -0.52
DDX39A-219ENST00000592927 THOC5Q13769 683 aaKnown RBP11.78□□□□□ -0.52
DDX39A-219ENST00000592927 EFTUD2Q15029 972 aaKnown RBP eCLIP11.78□□□□□ -0.526e-7■■■■■ 30.3
DDX39A-219ENST00000592927 TEDDM1Q5T9Z0 273 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 GRTP1Q5TC63 336 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 ZDHHC20Q5W0Z9 365 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 KCTD16Q68DU8 428 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 ESRP1Q6NXG1 681 aaKnown RBP11.78□□□□□ -0.52
DDX39A-219ENST00000592927 KIAA0408Q6ZU52 694 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 ZNF765Q7L2R6 523 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 MFSD2AQ8NA29 543 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 FAM174AQ8TBP5 190 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 SCG3Q8WXD2 468 aaKnown RBP11.78□□□□□ -0.52
DDX39A-219ENST00000592927 ZBTB9Q96C00 473 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 ZNF778Q96MU6 729 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 FAM167BQ9BTA0 163 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 RIOK2Q9BVS4 552 aaKnown RBP11.78□□□□□ -0.52
DDX39A-219ENST00000592927 CDH19Q9H159 772 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 ABCG8Q9H221 673 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 FAM83DQ9H4H8 585 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 BPIFA1Q9NP55 256 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 SMYD2Q9NRG4 433 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 NLE1Q9NVX2 485 aaPredicted RBP11.78□□□□□ -0.52
DDX39A-219ENST00000592927 IL17CQ9P0M4 197 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 CTNNAL1Q9UBT7 734 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 TBK1Q9UHD2 729 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 USP9XQ93008 2570 aaPredicted RBP11.78□□□□□ -0.52
DDX39A-219ENST00000592927 ZNF106Q9H2Y7 1883 aaKnown RBP11.78□□□□□ -0.52
DDX39A-219ENST00000592927 SCN8AQ9UQD0 1980 aa11.78□□□□□ -0.52
DDX39A-219ENST00000592927 POM121BA6NF01 834 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 A6NNZ2 444 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 H0Y8X5 98 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 ERVH48-1M5A8F1 160 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 MAGEC1O60732 1142 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 FAM155BO75949 473 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 VAPBO95292 243 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 PYGLP06737 847 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 ERVK-10P10266 1014 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 BPIP17213 487 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 NR1D1P20393 614 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 SPRP35270 261 aaPredicted RBP11.77□□□□□ -0.53
DDX39A-219ENST00000592927 IGFALSP35858 605 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 GPR1P46091 355 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 RABIFP47224 123 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 CSNK1EP49674 416 aaKnown RBP11.77□□□□□ -0.53
DDX39A-219ENST00000592927 C21orf59P57076 290 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 DCDC1P59894 354 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 PPP2R2AP63151 447 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 PRAMEP78395 509 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 DPTQ07507 201 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 OVGP1Q12889 678 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 INPP5AQ14642 412 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 PTPRCAPQ14761 206 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 HSP90AA5PQ58FG0 334 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 COLEC12Q5KU26 742 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 RAET1GQ6H3X3 334 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 PNCKQ6P2M8 343 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 KYAT3Q6YP21 454 aaKnown RBP11.77□□□□□ -0.53
DDX39A-219ENST00000592927 GCNT7Q6ZNI0 430 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 Q6ZSR6 202 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 PTAR1Q7Z6K3 402 aaPredicted RBP11.77□□□□□ -0.53
DDX39A-219ENST00000592927 ABI3BPQ7Z7G0 1075 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 GALNT7Q86SF2 657 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 TRABD2AQ86V40 505 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 EXOC3L1Q86VI1 746 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 IQCHQ86VS3 1027 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 NLRP8Q86W28 1048 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 UNC5BQ8IZJ1 945 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 PLA2G15Q8NCC3 412 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 GPR26Q8NDV2 337 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 OR4K2Q8NGD2 314 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 OR13J1Q8NGT2 312 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 SCAMP4Q969E2 229 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 ALKBH8Q96BT7 664 aaKnown RBP11.77□□□□□ -0.53
DDX39A-219ENST00000592927 MRRFQ96E11 262 aaKnown RBP11.77□□□□□ -0.53
DDX39A-219ENST00000592927 KLHDC7BQ96G42 594 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 SGSM3Q96HU1 749 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 BMFQ96LC9 184 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 PLEKHG4BQ96PX9 1271 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 SPATA16Q9BXB7 569 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 SEMA4CQ9C0C4 833 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 CNOT10Q9H9A5 744 aaKnown RBP11.77□□□□□ -0.53
DDX39A-219ENST00000592927 SSU72Q9NP77 194 aaKnown RBP11.77□□□□□ -0.53
DDX39A-219ENST00000592927 IARS2Q9NSE4 1012 aaKnown RBP11.77□□□□□ -0.53
DDX39A-219ENST00000592927 FNDC3AQ9Y2H6 1198 aaKnown RBP11.77□□□□□ -0.53
DDX39A-219ENST00000592927 KCTD3Q9Y597 815 aa11.77□□□□□ -0.53
DDX39A-219ENST00000592927 ADAMTS9Q9P2N4 1935 aa11.76□□□□□ -0.53
DDX39A-219ENST00000592927 PCDH15Q96QU1 1955 aa11.76□□□□□ -0.53
DDX39A-219ENST00000592927 A0A1W2PR77 199 aa11.76□□□□□ -0.53
DDX39A-219ENST00000592927 H7C0S8 307 aa11.76□□□□□ -0.53
DDX39A-219ENST00000592927 K7ESM1 405 aa11.76□□□□□ -0.53
DDX39A-219ENST00000592927 TLR4O00206 839 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms