RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CCDC137Q6PK04 289 aaKnown RBP9.92□□□□□ -0.82
BRCA1-227ENST00000591849 SPRED1Q7Z699 444 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 SERPINA9Q86WD7 417 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 LSMEM2Q8N112 164 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 NXPE1Q8N323 547 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 SFRP1Q8N474 314 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 RASGEF1AQ8N9B8 481 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 OR6P1Q8NGX9 317 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 OR10G6Q8NH81 332 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 MDM1Q8TC05 714 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 SLC37A2Q8TED4 501 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 COG1Q8WTW3 980 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 CXorf40BQ96DE9 158 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 SGF29Q96ES7 293 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 CDKN2AIPNLQ96HQ2 116 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 CAPZA3Q96KX2 299 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 NAPGQ99747 312 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-227ENST00000591849 C19orf43Q9BQ61 176 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-227ENST00000591849 CASS4Q9NQ75 786 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 EIF2B3Q9NR50 452 aaKnown RBP9.92□□□□□ -0.82
BRCA1-227ENST00000591849 SMOXQ9NWM0 555 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 ZDHHC3Q9NYG2 299 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 SMARCAL1Q9NZC9 954 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 FAM8A1Q9UBU6 413 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 SLC23A2Q9UGH3 650 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 RABGEF1Q9UJ41 708 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 PCDHB1Q9Y5F3 818 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 PCYT1BQ9Y5K3 369 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-227ENST00000591849 ST14Q9Y5Y6 855 aa9.92□□□□□ -0.82
BRCA1-227ENST00000591849 KNTC1P50748 2209 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 CCDC187A0A096LP49 1063 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 F8W8V4 182 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 AGRPO00253 132 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 NTN3O00634 580 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-227ENST00000591849 CES2O00748 559 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 GAPDHSO14556 408 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-227ENST00000591849 ZNF185O15231 689 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 PPM1DO15297 605 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 B4GAT1O43505 415 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 PHF2O75151 1096 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 CPNE6O95741 557 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 MPOP05164 745 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 ATP1B2P14415 290 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-227ENST00000591849 RPL10P27635 214 aaKnown RBP9.91□□□□□ -0.82
BRCA1-227ENST00000591849 CTSCP53634 463 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 DRG2P55039 364 aaKnown RBP9.91□□□□□ -0.82
BRCA1-227ENST00000591849 GABREP78334 506 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 CDK16Q00536 496 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 B4GALNT1Q00973 533 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 CAMK2BQ13554 666 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 FASTKD1Q53R41 847 aaKnown RBP9.91□□□□□ -0.82
BRCA1-227ENST00000591849 C3orf38Q5JPI3 329 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 PCID2Q5JVF3 399 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 TSTD2Q5T7W7 516 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 LYPLAL1Q5VWZ2 237 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 OTUD6BQ8N6M0 293 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 WDR36Q8NI36 951 aaKnown RBP9.91□□□□□ -0.82
BRCA1-227ENST00000591849 HDAC10Q969S8 669 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 ATXN7L3BQ96GX2 97 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 FOXP3Q9BZS1 431 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 VPS37BQ9H9H4 285 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 POLR1BQ9H9Y6 1135 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 WDR70Q9NW82 654 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 CPNE7Q9UBL6 633 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 SAR1BQ9Y6B6 198 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 PLXNB3Q9ULL4 1909 aa9.91□□□□□ -0.82
BRCA1-227ENST00000591849 ADAMTS20P59510 1910 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 A0A1W2PQM1 296 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 CCDC162PA2VCL2 907 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 KLHL33A6NCF5 533 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 MGAT4DA6NG13 374 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 MROH6A6NGR9 719 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 D6RAR5 112 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 H7C0S8 307 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 DUX1O43812 170 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 EML2O95834 649 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 POLBP06746 335 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 AMD1P17707 334 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 ACRV1P26436 265 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 CASQ1P31415 396 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 CA5AP35218 305 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 LSSP48449 732 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 FNTAP49354 379 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 GPLD1P80108 840 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 RTP5Q14D33 572 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 NKAIN2Q5VXU1 208 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 TTC27Q6P3X3 843 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 CASC4Q6P4E1 433 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 AFTPHQ6ULP2 937 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 C17orf82Q86X59 251 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-227ENST00000591849 ZNF761Q86XN6 746 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-227ENST00000591849 ZNF547Q8IVP9 402 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 CFAP206Q8IYR0 622 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 FBXO39Q8N4B4 442 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 BEND7Q8N7W2 519 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-227ENST00000591849 NCSTNQ92542 709 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 RANBP9Q96S59 729 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 DPYSL5Q9BPU6 564 aa9.9□□□□□ -0.82
BRCA1-227ENST00000591849 IL22Q9GZX6 179 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms