RNA–Protein interactions for RNA: ENST00000591075.1

NPC1-211, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-211ENST00000591075 POPDC3Q9HBV1 291 aa8.79□□□□□ -1
NPC1-211ENST00000591075 IARS2Q9NSE4 1012 aaKnown RBP8.79□□□□□ -1
NPC1-211ENST00000591075 EURLQ9NYK6 297 aa8.79□□□□□ -1
NPC1-211ENST00000591075 OGFRQ9NZT2 677 aa8.79□□□□□ -1
NPC1-211ENST00000591075 PCOLCE2Q9UKZ9 415 aa8.79□□□□□ -1
NPC1-211ENST00000591075 SPO11Q9Y5K1 396 aa8.79□□□□□ -1
NPC1-211ENST00000591075 FADS3Q9Y5Q0 445 aa8.79□□□□□ -1
NPC1-211ENST00000591075 HS3ST3A1Q9Y663 406 aa8.79□□□□□ -1
NPC1-211ENST00000591075 LOC100996750A0A140TA64 210 aa8.78□□□□□ -1
NPC1-211ENST00000591075 A0A1W2PR77 199 aa8.78□□□□□ -1
NPC1-211ENST00000591075 CCDC162PA2VCL2 907 aa8.78□□□□□ -1
NPC1-211ENST00000591075 IGLON5A6NGN9 336 aa8.78□□□□□ -1
NPC1-211ENST00000591075 NPIPB15A6NHN6 443 aaPredicted RBP8.78□□□□□ -1
NPC1-211ENST00000591075 KPNA5O15131 536 aa8.78□□□□□ -1
NPC1-211ENST00000591075 TNFSF14O43557 240 aa8.78□□□□□ -1
NPC1-211ENST00000591075 LZTS3O60299 673 aaPredicted RBP8.78□□□□□ -1
NPC1-211ENST00000591075 TM7SF2O76062 418 aa8.78□□□□□ -1
NPC1-211ENST00000591075 AP2A2O94973 939 aa8.78□□□□□ -1
NPC1-211ENST00000591075 LDOC1O95751 146 aaPredicted RBP8.78□□□□□ -1
NPC1-211ENST00000591075 SYF2O95926 243 aaKnown RBP8.78□□□□□ -1
NPC1-211ENST00000591075 AHSGP02765 367 aa8.78□□□□□ -1
NPC1-211ENST00000591075 ESR1P03372 595 aa8.78□□□□□ -1
NPC1-211ENST00000591075 SHBGP04278 402 aa8.78□□□□□ -1
NPC1-211ENST00000591075 WNT1P04628 370 aa8.78□□□□□ -1
NPC1-211ENST00000591075 GSTA1P08263 222 aa8.78□□□□□ -1
NPC1-211ENST00000591075 ITGA2BP08514 1039 aa8.78□□□□□ -1
NPC1-211ENST00000591075 ALPIP09923 528 aa8.78□□□□□ -1
NPC1-211ENST00000591075 FTH1P19P0C7X4 201 aa8.78□□□□□ -1
NPC1-211ENST00000591075 ALPPL2P10696 532 aa8.78□□□□□ -1
NPC1-211ENST00000591075 CTPS1P17812 591 aa8.78□□□□□ -1
NPC1-211ENST00000591075 RPS3P23396 243 aaKnown RBP eCLIP8.78□□□□□ -13e-8■■■■□ 22.2
NPC1-211ENST00000591075 ARNTP27540 789 aa8.78□□□□□ -1
NPC1-211ENST00000591075 MC4RP32245 332 aa8.78□□□□□ -1
NPC1-211ENST00000591075 NSG1P42857 185 aa8.78□□□□□ -1
NPC1-211ENST00000591075 KPNA2P52292 529 aaKnown RBP8.78□□□□□ -1
NPC1-211ENST00000591075 THOP1P52888 689 aa8.78□□□□□ -1
NPC1-211ENST00000591075 SLC12A2P55011 1212 aa8.78□□□□□ -1
NPC1-211ENST00000591075 XIAPP98170 497 aa8.78□□□□□ -1
NPC1-211ENST00000591075 NFATC2Q13469 925 aa8.78□□□□□ -1
NPC1-211ENST00000591075 ZNF470Q6ECI4 717 aa8.78□□□□□ -1
NPC1-211ENST00000591075 FAM45BPQ6NSW5 357 aa8.78□□□□□ -1
NPC1-211ENST00000591075 TRMT10BQ6PF06 316 aaKnown RBP8.78□□□□□ -1
NPC1-211ENST00000591075 CES3Q6UWW8 571 aa8.78□□□□□ -1
NPC1-211ENST00000591075 Q6ZSR6 202 aa8.78□□□□□ -1
NPC1-211ENST00000591075 ZC3HC1Q86WB0 502 aaKnown RBP8.78□□□□□ -1
NPC1-211ENST00000591075 ZSWIM9Q86XI8 627 aa8.78□□□□□ -1
NPC1-211ENST00000591075 GATAD2AQ86YP4 633 aa8.78□□□□□ -1
NPC1-211ENST00000591075 HOMEZQ8IX15 550 aa8.78□□□□□ -1
NPC1-211ENST00000591075 RBFAQ8N0V3 343 aa8.78□□□□□ -1
NPC1-211ENST00000591075 KRT222Q8N1A0 295 aa8.78□□□□□ -1
NPC1-211ENST00000591075 OTUD6BQ8N6M0 293 aa8.78□□□□□ -1
NPC1-211ENST00000591075 OR13C4Q8NGS5 318 aa8.78□□□□□ -1
NPC1-211ENST00000591075 UHMK1Q8TAS1 419 aaKnown RBP8.78□□□□□ -1
NPC1-211ENST00000591075 FAM45AQ8TCE6 357 aa8.78□□□□□ -1
NPC1-211ENST00000591075 ISL2Q96A47 359 aa8.78□□□□□ -1
NPC1-211ENST00000591075 TLCD1Q96CP7 247 aa8.78□□□□□ -1
NPC1-211ENST00000591075 ZNF514Q96K75 400 aaPredicted RBP8.78□□□□□ -1
NPC1-211ENST00000591075 COQ10AQ96MF6 247 aa8.78□□□□□ -1
NPC1-211ENST00000591075 ZNF778Q96MU6 729 aa8.78□□□□□ -1
NPC1-211ENST00000591075 TSNARE1Q96NA8 513 aa8.78□□□□□ -1
NPC1-211ENST00000591075 CNTNAP3BQ96NU0 1288 aa8.78□□□□□ -1
NPC1-211ENST00000591075 PANX3Q96QZ0 392 aa8.78□□□□□ -1
NPC1-211ENST00000591075 GPR22Q99680 433 aa8.78□□□□□ -1
NPC1-211ENST00000591075 KRTAP4-6Q9BYQ5 205 aa8.78□□□□□ -1
NPC1-211ENST00000591075 CNTNAP3Q9BZ76 1288 aa8.78□□□□□ -1
NPC1-211ENST00000591075 CENPHQ9H3R5 247 aa8.78□□□□□ -1
NPC1-211ENST00000591075 ASB8Q9H765 288 aa8.78□□□□□ -1
NPC1-211ENST00000591075 SYTL2Q9HCH5 934 aa8.78□□□□□ -1
NPC1-211ENST00000591075 FZD3Q9NPG1 666 aa8.78□□□□□ -1
NPC1-211ENST00000591075 IL26Q9NPH9 171 aa8.78□□□□□ -1
NPC1-211ENST00000591075 EVA1BQ9NVM1 165 aa8.78□□□□□ -1
NPC1-211ENST00000591075 FAM53CQ9NYF3 392 aa8.78□□□□□ -1
NPC1-211ENST00000591075 DCDC2Q9UHG0 476 aa8.78□□□□□ -1
NPC1-211ENST00000591075 TLK1Q9UKI8 766 aa8.78□□□□□ -1
NPC1-211ENST00000591075 CA5BQ9Y2D0 317 aa8.78□□□□□ -1
NPC1-211ENST00000591075 GOLGA4Q13439 2230 aaKnown RBP8.78□□□□□ -1
NPC1-211ENST00000591075 CACNA1BQ00975 2339 aa8.77□□□□□ -1
NPC1-211ENST00000591075 KNTC1P50748 2209 aa8.77□□□□□ -1.01
NPC1-211ENST00000591075 NEMP2A6NFY4 417 aa8.77□□□□□ -1.01
NPC1-211ENST00000591075 H3BM21 787 aa8.77□□□□□ -1.01
NPC1-211ENST00000591075 EIF3FO00303 357 aaPredicted RBP8.77□□□□□ -1.01
NPC1-211ENST00000591075 PRMT5O14744 637 aaPredicted RBP8.77□□□□□ -1.01
NPC1-211ENST00000591075 HYAL3O43820 417 aaPredicted RBP8.77□□□□□ -1.01
NPC1-211ENST00000591075 KCNJ13O60928 360 aa8.77□□□□□ -1.01
NPC1-211ENST00000591075 PRAMEF1O95521 474 aa8.77□□□□□ -1.01
NPC1-211ENST00000591075 S1PR4O95977 384 aa8.77□□□□□ -1.01
NPC1-211ENST00000591075 HOXC4P09017 264 aaPredicted RBP8.77□□□□□ -1.01
NPC1-211ENST00000591075 PIRTP0C851 137 aa8.77□□□□□ -1.01
NPC1-211ENST00000591075 BPIP17213 487 aa8.77□□□□□ -1.01
NPC1-211ENST00000591075 GCAP28676 217 aa8.77□□□□□ -1.01
NPC1-211ENST00000591075 TYK2P29597 1187 aa8.77□□□□□ -1.01
NPC1-211ENST00000591075 FOXN2P32314 431 aa8.77□□□□□ -1.01
NPC1-211ENST00000591075 RABIFP47224 123 aa8.77□□□□□ -1.01
NPC1-211ENST00000591075 RXRGP48443 463 aa8.77□□□□□ -1.01
NPC1-211ENST00000591075 LIG3P49916 1009 aa8.77□□□□□ -1.01
NPC1-211ENST00000591075 SERPINB8P50452 374 aa8.77□□□□□ -1.01
NPC1-211ENST00000591075 CLDN2P57739 230 aa8.77□□□□□ -1.01
NPC1-211ENST00000591075 SHC2P98077 582 aa8.77□□□□□ -1.01
NPC1-211ENST00000591075 PLOD1Q02809 727 aaPredicted RBP8.77□□□□□ -1.01
NPC1-211ENST00000591075 RALGDSQ12967 914 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms