RNA–Protein interactions for RNA: ENST00000589742.5

RFX2-215, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-215	ENST00000589742	SGTA	O43765	313 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	OR1I1	O60431	355 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	SEC31A	O94979	1220 aa	Known RBP	11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	TOP3B	O95985	862 aa	Known RBP	11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	GPR89B	P0CG08	455 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	ATP1B2	P14415	290 aa	Predicted RBP	11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	ACP1	P24666	158 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	ARNT	P27540	789 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	LRP8	Q14114	963 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	SEPT7	Q16181	437 aa	Known RBP	11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	FASTKD1	Q53R41	847 aa	Known RBP	11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	PERM1	Q5SV97	790 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	DHRS13	Q6UX07	377 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	EFL1	Q7Z2Z2	1120 aa	Known RBP	11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	IGDCC3	Q8IVU1	814 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	NAGS	Q8N159	534 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	CLDN19	Q8N6F1	224 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	ARL10	Q8N8L6	244 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	LRRC1	Q9BTT6	524 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	PRDM8	Q9NQV8	689 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	CATSPERZ	Q9NTU4	200 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	APOBEC2	Q9Y235	224 aa	Known RBP	11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	RPS6KL1	Q9Y6S9	549 aa		11.74	□□□□□ -0.53
RFX2-215	ENST00000589742	IGLV3-16	A0A075B6K0	115 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	MED19	A0JLT2	244 aa	Predicted RBP	11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	EME2	A4GXA9	379 aa	Predicted RBP	11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	CFAP99	D6REC4	459 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	CD3EAP	O15446	510 aa	Known RBP	11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	ZFC3H1	O60293	1989 aa	Known RBP	11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	F7	P08709	466 aa	Predicted RBP	11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	RALB	P11234	206 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	RPL10	P27635	214 aa	Known RBP	11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	RPIA	P49247	311 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	DUSP3	P51452	185 aa	Predicted RBP	11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	FOXC1	Q12948	553 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	TUBB2A	Q13885	445 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	NFE2L1	Q14494	772 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	C14orf28	Q4W4Y0	310 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	DNAJC21	Q5F1R6	531 aa	Known RBP	11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	AMZ2	Q86W34	360 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	ARL14	Q8N4G2	192 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	CHCHD4	Q8N4Q1	142 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	LILRA3	Q8N6C8	439 aa	Predicted RBP	11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	OTUD6B	Q8N6M0	293 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	NOA1	Q8NC60	698 aa	Known RBP	11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	IFI44	Q8TCB0	444 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	HEXDC	Q8WVB3	486 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	STAMBPL1	Q96FJ0	436 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	SGSM3	Q96HU1	749 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	EBNA1BP2	Q99848	306 aa	Known RBP	11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	TIMM29	Q9BSF4	260 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	TUBB2B	Q9BVA1	445 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	CARD6	Q9BX69	1037 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	RABGEF1	Q9UJ41	708 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	UTP11	Q9Y3A2	253 aa	Known RBP	11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	RNF215	Q9Y6U7	377 aa		11.73	□□□□□ -0.53
RFX2-215	ENST00000589742	COL5A1	P20908	1838 aa	Predicted RBP	11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	ZCWPW2	A0A1B0GU75	182 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	CTAGE15	A4D2H0	777 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	RFPL3	O75679	317 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	CTAGE8	P0CG41	777 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	ITGB6	P18564	788 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	SPINK2	P20155	84 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	ELK3	P41970	407 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	ARCN1	P48444	511 aa	Known RBP	11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	CLCNKA	P51800	687 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	DRG2	P55039	364 aa	Known RBP	11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	ARL4C	P56559	192 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	CALCOCO2	Q13137	446 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	ITIH4	Q14624	930 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	BCL7A	Q4VC05	210 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	LYPLAL1	Q5VWZ2	237 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	KIAA0930	Q6ICG6	404 aa	Predicted RBP	11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	C8orf74	Q6P047	294 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	IYD	Q6PHW0	289 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	TMEM135	Q86UB9	458 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	CTAGE6	Q86UF2	777 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	MARCH9	Q86YJ5	346 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	ANKMY2	Q8IV38	441 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	CTAGE4	Q8IX94	777 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	UNC5B	Q8IZJ1	945 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	PDIK1L	Q8N165	341 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	MMGT1	Q8N4V1	131 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742		Q8N9G6	341 aa	Predicted RBP	11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	BBOF1	Q8ND07	529 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	MNS1	Q8NEH6	495 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	SLC37A2	Q8TED4	501 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	CCDC74A	Q96AQ1	378 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	CFAP36	Q96G28	342 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	ZNF514	Q96K75	400 aa	Predicted RBP	11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	TTC1	Q99614	292 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	WDR83	Q9BRX9	315 aa	Known RBP	11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	EVA1B	Q9NVM1	165 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	GRHL1	Q9NZI5	618 aa		11.72	□□□□□ -0.53
RFX2-215	ENST00000589742	WHRN	Q9P202	907 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms