RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 RASGRF2O14827 1237 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 GRID2O43424 1007 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 OR1I1O60431 355 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 DFNA5O60443 496 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 MTX2O75431 263 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 RASGRP1O95267 797 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 ITGA2BP08514 1039 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 ZNF8P17098 575 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 GABRB3P28472 473 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 SKIV2L2P42285 1042 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 NXPH1P58417 271 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 SRP54P61011 504 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 POU4F1Q01851 419 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 PLOD1Q02809 727 aaPredicted RBP16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 PPARDQ03181 441 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 KHDC1Q4VXA5 237 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 CNSTQ6PJW8 725 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 RASGEF1AQ8N9B8 481 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 BIRC8Q96P09 236 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 GPR22Q99680 433 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 TIMM29Q9BSF4 260 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 AARSD1Q9BTE6 412 aaKnown RBP16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 ACBD3Q9H3P7 528 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 TAS2R13Q9NYV9 303 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 TMEM98Q9Y2Y6 226 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 HCN4Q9Y3Q4 1203 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 WDFY4Q6ZS81 3184 aa16.73■□□□□ 0.27
SCAMP4-211ENST00000588907 ATXN2Q99700 1313 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 YKT6O15498 198 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 DNAJC6O75061 913 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 VPS26AO75436 327 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 TNFP01375 233 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 SHBGP04278 402 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 WNT1P04628 370 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 SYPP08247 313 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 FMO4P31512 558 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 CA5AP35218 305 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 CSNK1EP49674 416 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 SLC12A2P55011 1212 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 FZD2Q14332 565 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 SLC23A3Q6PIS1 610 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 TMEM220Q6QAJ8 160 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 SDR16C5Q8N3Y7 309 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 CLDN19Q8N6F1 224 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 GPATCH11Q8N954 259 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 DCAKDQ8WVC6 231 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 ANKRD7Q92527 254 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 ATOH1Q92858 354 aaPredicted RBP16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 SGF29Q96ES7 293 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 OR2M4Q96R27 311 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 CCM2Q9BSQ5 444 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 SLC13A1Q9BZW2 595 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 CARS2Q9HA77 564 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 POPDC3Q9HBV1 291 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 FGF22Q9HCT0 170 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 SPATS2LQ9NUQ6 558 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 TRNAU1APQ9NX07 287 aaKnown RBP16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 SLC17A6Q9P2U8 582 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 GMEB2Q9UKD1 530 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 SUFUQ9UMX1 484 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 ANKRD6Q9Y2G4 727 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 GON4LQ3T8J9 2241 aa16.72■□□□□ 0.27
SCAMP4-211ENST00000588907 FAM95CA0A1B0GW59 222 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 GOLGA6L10A6NI86 522 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 OR2AG2A6NM03 316 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 CSF2P04141 144 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 RETP07949 1114 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 SNRPAP09012 282 aaKnown RBP16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 NME1P15531 152 aaKnown RBP16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 MPLP40238 635 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 ARRB1P49407 418 aaPredicted RBP16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 HK3P52790 923 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 HNRNPKP61978 463 aaKnown RBP eCLIP16.71■□□□□ 0.271e-9■□□□□ 10.2
SCAMP4-211ENST00000588907 TMED2Q15363 201 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 ALG11Q2TAA5 492 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 TTLL9Q3SXZ7 439 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 PYCR3Q53H96 274 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 ZNF789Q5FWF6 425 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 CTSL3PQ5NE16 218 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 HECTD2Q5U5R9 776 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 LRRC8EQ6NSJ5 796 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 DET1Q7L5Y6 550 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 AMZ2Q86W34 360 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 ELMO2Q96JJ3 720 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 CYP4F12Q9HCS2 524 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 TMEM74BQ9NUR3 256 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 ZNHIT2Q9UHR6 403 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 MOSPD1Q9UJG1 213 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 SLC6A14Q9UN76 642 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 VWA7Q9Y334 891 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 NFS1Q9Y697 457 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 SLCO1B1Q9Y6L6 691 aa16.71■□□□□ 0.27
SCAMP4-211ENST00000588907 CACNA1EQ15878 2313 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 PIKFYVEQ9Y2I7 2098 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 MGAT4DA6NG13 374 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 EIF3FO00303 357 aaPredicted RBP16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 LIN7AO14910 233 aaPredicted RBP16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 SGTAO43765 313 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 PIAS1O75925 651 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 CFIP05156 583 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms