RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 TRIM4Q9C037 500 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 FAM117AQ9C073 453 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 TRABDQ9H4I3 376 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 STARD5Q9NSY2 213 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 IL17CQ9P0M4 197 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 RSPH14Q9UHP6 348 aa14.1□□□□□ -0.15
VMP1-206ENST00000587945 MN1Q10571 1320 aaPredicted RBP14.1□□□□□ -0.15
VMP1-206ENST00000587945 POLR1CO15160 346 aaPredicted RBP14.09□□□□□ -0.15
VMP1-206ENST00000587945 CAPN5O15484 640 aaPredicted RBP14.09□□□□□ -0.15
VMP1-206ENST00000587945 NKX2-8O15522 239 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 KIF1CO43896 1103 aaKnown RBP14.09□□□□□ -0.15
VMP1-206ENST00000587945 LCA5LO95447 670 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 AGTP01019 485 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 C9P02748 559 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 PRKAR1AP10644 381 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 IDSP22304 550 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 RBL1P28749 1068 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 SPAM1P38567 509 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 TNNT3P45378 269 aaPredicted RBP14.09□□□□□ -0.15
VMP1-206ENST00000587945 SH3BP2P78314 561 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 FOXM1Q08050 763 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 GTF2H3Q13889 308 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 PPP2R5EQ16537 467 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 AGAP9Q5VTM2 703 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 SARM1Q6SZW1 724 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 RASGEF1AQ8N9B8 481 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 NAT14Q8WUY8 206 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 CXorf40BQ96DE9 158 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 TTC25Q96NG3 672 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 GPN2Q9H9Y4 310 aaPredicted RBP14.09□□□□□ -0.15
VMP1-206ENST00000587945 SLC40A1Q9NP59 571 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 POT1Q9NUX5 634 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 SIDT1Q9NXL6 827 aaKnown RBP14.09□□□□□ -0.15
VMP1-206ENST00000587945 IL17BQ9UHF5 180 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 HEMK1Q9Y5R4 338 aaPredicted RBP14.09□□□□□ -0.15
VMP1-206ENST00000587945 BSNQ9UPA5 3926 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 SDK2Q58EX2 2172 aa14.09□□□□□ -0.15
VMP1-206ENST00000587945 GLYATL1P3A0A0U1RQE8 302 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 RCCD1A6NED2 376 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 HACD1B0YJ81 288 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 H7C0C1 242 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 GAPDHSO14556 408 aaPredicted RBP14.08□□□□□ -0.16
VMP1-206ENST00000587945 POP7O75817 140 aaKnown RBP14.08□□□□□ -0.16
VMP1-206ENST00000587945 RASSF9O75901 435 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 ANKRD34CP0C6C1 535 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 ZNF28P17035 718 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 HLA-DPA1P20036 260 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 MAP4P27816 1152 aaKnown RBP14.08□□□□□ -0.16
VMP1-206ENST00000587945 ATP5OP48047 213 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 MPP3Q13368 585 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 OLIG2Q13516 323 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 GPR18Q14330 331 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 SPA17Q15506 151 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 GPRC6AQ5T6X5 926 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 C11orf63Q6NUN7 778 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 BORAQ6PGQ7 559 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 TMEM220Q6QAJ8 160 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 WASH2PQ6VEQ5 465 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 FAM83HQ6ZRV2 1179 aaPredicted RBP14.08□□□□□ -0.16
VMP1-206ENST00000587945 BBS12Q6ZW61 710 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 DAAM2Q86T65 1068 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 CCDC170Q8IYT3 715 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 RBM41Q96IZ5 413 aaKnown RBP14.08□□□□□ -0.16
VMP1-206ENST00000587945 ELMO2Q96JJ3 720 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 SLC45A3Q96JT2 553 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 VAT1Q99536 393 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 FAM118BQ9BPY3 351 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 APOL2Q9BQE5 337 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 GORASP1Q9BQQ3 440 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 ZPBPQ9BS86 351 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 FICDQ9BVA6 458 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 WASH6PQ9NQA3 447 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 GEMIN8Q9NWZ8 242 aaKnown RBP14.08□□□□□ -0.16
VMP1-206ENST00000587945 HACD3Q9P035 362 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 TRHDEQ9UKU6 1024 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 PSMD13Q9UNM6 376 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 TMEM184BQ9Y519 407 aaPredicted RBP14.08□□□□□ -0.16
VMP1-206ENST00000587945 ARL5AQ9Y689 179 aa14.08□□□□□ -0.16
VMP1-206ENST00000587945 MACROD2A1Z1Q3 448 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 OR2AG2A6NM03 316 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 ZNF891A8MT65 544 aaPredicted RBP14.07□□□□□ -0.16
VMP1-206ENST00000587945 DLGAP3O95886 979 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 VCLP18206 1134 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 PBLDP30039 288 aaPredicted RBP14.07□□□□□ -0.16
VMP1-206ENST00000587945 CAPZBP47756 277 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 PPP1CAP62136 330 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 NFE2L1Q14494 772 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 CCDC181Q5TID7 509 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 ZDHHC20Q5W0Z9 365 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 IRGCQ6NXR0 463 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 FAM92BQ6ZTR7 304 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 DET1Q7L5Y6 550 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 AMZ2Q86W34 360 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 GPR150Q8NGU9 434 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 BRSK1Q8TDC3 778 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 KIAA1143Q96AT1 154 aaPredicted RBP14.07□□□□□ -0.16
VMP1-206ENST00000587945 OR6C1Q96RD1 312 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 FSD1LQ9BXM9 530 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 GBA3Q9H227 469 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms