RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 SLC26A11Q86WA9 606 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 ZNF354CQ86Y25 554 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 ARHGAP12Q8IWW6 846 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 PHACTR4Q8IZ21 702 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 SDR16C5Q8N3Y7 309 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 Q8N9G6 341 aaPredicted RBP7.79□□□□□ -1.16
VMP1-204ENST00000587259 DNAAF3Q8N9W5 541 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 KYQ8NBH2 561 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 UHMK1Q8TAS1 419 aaKnown RBP7.79□□□□□ -1.16
VMP1-204ENST00000587259 SNRNP27Q8WVK2 155 aaKnown RBP7.79□□□□□ -1.16
VMP1-204ENST00000587259 DYDC1Q8WWB3 177 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 SLC44A1Q8WWI5 657 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 JPH3Q8WXH2 748 aaPredicted RBP7.79□□□□□ -1.16
VMP1-204ENST00000587259 TSACCQ96A04 125 aaPredicted RBP7.79□□□□□ -1.16
VMP1-204ENST00000587259 CCDC74AQ96AQ1 378 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 WBP1Q96G27 269 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 CFAP36Q96G28 342 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 FEM1CQ96JP0 617 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 PWWP2AQ96N64 755 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 AGAP3Q96P47 875 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 PAFAH2Q99487 392 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 HEPHQ9BQS7 1158 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 DHRS4Q9BTZ2 278 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 WRAP53Q9BUR4 548 aaKnown RBP7.79□□□□□ -1.16
VMP1-204ENST00000587259 DUSP23Q9BVJ7 150 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 BOCQ9BWV1 1114 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 C1QTNF2Q9BXJ5 285 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 CCDC134Q9H6E4 229 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 MRM3Q9HC36 420 aaKnown RBP7.79□□□□□ -1.16
VMP1-204ENST00000587259 GLOD4Q9HC38 313 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 CASS4Q9NQ75 786 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 HECAQ9UBI9 543 aaPredicted RBP7.79□□□□□ -1.16
VMP1-204ENST00000587259 ATXN7L1Q9ULK2 861 aaPredicted RBP7.79□□□□□ -1.16
VMP1-204ENST00000587259 PADI4Q9UM07 663 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 HS3ST3A1Q9Y663 406 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 SPTA1P02549 2419 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 FAM237BA0A1B0GVD1 139 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 A0A1W2PQM1 296 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 ILVBLA1L0T0 632 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 H3BM21 787 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 TM9SF1O15321 606 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 INSIG1O15503 277 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 FAM155BO75949 473 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 PRKCGP05129 697 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 ANXA6P08133 673 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 NFKB1P19838 968 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 CA4P22748 312 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 UGT1A5P35504 534 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 HADHAP40939 763 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 ETV5P41161 510 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 PAPOLAP51003 745 aaKnown RBP7.78□□□□□ -1.16
VMP1-204ENST00000587259 ZBTB17Q13105 803 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 SPIDRQ14159 915 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 ZNF235Q14590 738 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 SEPT7Q16181 437 aaKnown RBP7.78□□□□□ -1.16
VMP1-204ENST00000587259 RALGPS1Q5JS13 557 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 COLEC12Q5KU26 742 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 KIAA1161Q6NSJ0 714 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 UNC5AQ6ZN44 842 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 MARK2Q7KZI7 788 aaKnown RBP7.78□□□□□ -1.16
VMP1-204ENST00000587259 TMPRSS9Q7Z410 1059 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 CLEC14AQ86T13 490 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 EXOC3L1Q86VI1 746 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 ZFAND4Q86XD8 727 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 SRRM1Q8IYB3 904 aaKnown RBP7.78□□□□□ -1.16
VMP1-204ENST00000587259 TAB3Q8N5C8 712 aaPredicted RBP7.78□□□□□ -1.16
VMP1-204ENST00000587259 TEX26Q8N6G2 289 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 PPHLN1Q8NEY8 458 aaKnown RBP7.78□□□□□ -1.16
VMP1-204ENST00000587259 WDR36Q8NI36 951 aaKnown RBP7.78□□□□□ -1.16
VMP1-204ENST00000587259 PEX13Q92968 403 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 IFT43Q96FT9 208 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 PPP1R16AQ96I34 528 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 CELF6Q96J87 481 aaKnown RBP7.78□□□□□ -1.16
VMP1-204ENST00000587259 SIGLEC10Q96LC7 697 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 KLHL32Q96NJ5 620 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 CCNL2Q96S94 520 aaPredicted RBP7.78□□□□□ -1.16
VMP1-204ENST00000587259 SLC39A8Q9C0K1 460 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 POLR1EQ9GZS1 481 aaKnown RBP7.78□□□□□ -1.16
VMP1-204ENST00000587259 IQCGQ9H095 443 aaKnown RBP7.78□□□□□ -1.16
VMP1-204ENST00000587259 SLC25A51Q9H1U9 297 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 EPN3Q9H201 632 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 TRABDQ9H4I3 376 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 RBM22Q9NW64 420 aaKnown RBP eCLIP7.78□□□□□ -1.16
VMP1-204ENST00000587259 FOXJ2Q9P0K8 574 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 PISDQ9UG56 409 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 PCDHGA8Q9Y5G5 932 aa7.78□□□□□ -1.16
VMP1-204ENST00000587259 PTPN13Q12923 2485 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 AHCTF1Q8WYP5 2266 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 CCDC187A0A096LP49 1063 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 PRAMEF33A0A0G2JMD5 474 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 TMEM120BA0PK00 339 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 FAM159BA6NKW6 160 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 NTN3O00634 580 aaPredicted RBP7.77□□□□□ -1.17
VMP1-204ENST00000587259 PLD2O14939 933 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 LZTS3O60299 673 aaPredicted RBP7.77□□□□□ -1.17
VMP1-204ENST00000587259 PRAMEF10O60809 474 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 PRAMEF11O60813 436 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 FAM107AO95990 144 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 JCHAINP01591 159 aa7.77□□□□□ -1.17
VMP1-204ENST00000587259 RPLP0P05388 317 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms