RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 DKK4Q9UBT3 224 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 CLIP2Q9UDT6 1046 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 NME7Q9Y5B8 376 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 UBIAD1Q9Y5Z9 338 aa1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 EPN1Q9Y6I3 576 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-211ENST00000584897 CXorf51AA0A1B0GTR3 108 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 DDTLA6NHG4 134 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC38A8A6NNN8 435 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 KCNJ18B7U540 433 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 NKX2-8O15522 239 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 TGDSO95455 350 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 VNN1O95497 513 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 FTCDO95954 541 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 CSF1P09603 554 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 CCDC175P0C221 793 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 PCNAP12004 261 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ENGP17813 658 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 RFC1P35251 1148 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 SOAT1P35610 550 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 BSGP35613 385 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 HADHAP40939 763 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF131P52739 623 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 CSE1LP55060 971 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 TAS2R50P59544 299 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 YWHAEP62258 255 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ACSM2AQ08AH3 577 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM115Q12893 351 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ACVR2BQ13705 512 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 KCNJ12Q14500 433 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 IL13RA2Q14627 380 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 MAPK6Q16659 721 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 GEN1Q17RS7 908 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 TRIM60Q495X7 471 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 XKR3Q5GH77 459 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 C1QTNF12Q5T7M4 302 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ACSM2BQ68CK6 577 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 SNRNP48Q6IEG0 339 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM81Q6P7N7 255 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 DPY19L3Q6ZPD9 716 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ADGRA1Q86SQ6 560 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 IGFN1Q86VF2 1251 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ADGRG5Q8IZF4 528 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 PTGR2Q8N8N7 351 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 C11orf65Q8NCR3 313 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 GDAP1Q8TB36 358 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ADAMTS18Q8TE60 1221 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 P2RX5Q93086 422 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 PKNOX2Q96KN3 472 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 MOV10L1Q9BXT6 1211 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 MIS12Q9H081 205 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 OSGEPL1Q9H4B0 414 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ST6GALNAC4Q9H4F1 302 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 PSTPIP2Q9H939 334 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 SFXN1Q9H9B4 322 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 IL1RAPL2Q9NP60 686 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC38A7Q9NVC3 462 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 MARCH4Q9P2E8 410 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 TBC1D14Q9P2M4 693 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 AMACRQ9UHK6 382 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 DDX25Q9UHL0 483 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ADAM21Q9UKJ8 722 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 AMFRQ9UKV5 643 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 NENFQ9UMX5 172 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 GABRQQ9UN88 632 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM169AQ9Y6X4 670 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 LOC730098B7Z3J9 87 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 B3GALNT1O75752 331 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 SMC2O95347 1197 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 F9P00740 461 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 GALTP07902 379 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 SFPQP23246 707 aaKnown RBP eCLIP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 HOXD13P35453 343 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 HNF4AP41235 474 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 CLCN2P51788 898 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 GALCP54803 685 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 EEFSECP57772 596 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 DMWDQ09019 674 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ILF2Q12905 390 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 CYP2A13Q16696 494 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 HIST2H2ACQ16777 129 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM187BQ17R55 369 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 C9orf152Q5JTZ5 239 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC39A5Q6ZMH5 540 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF788Q6ZQV5 615 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 NEK8Q86SG6 692 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 PRPF39Q86UA1 669 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 CNGA4Q8IV77 575 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ZBTB8OSQ8IWT0 167 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 C4orf19Q8IY42 314 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ADGRF2Q8IZF7 708 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 CPXM2Q8N436 756 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 WDTC1Q8N5D0 677 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 DPP10Q8N608 796 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 OR1N1Q8NGS0 311 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 KIF18AQ8NI77 898 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 BADQ92934 168 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 RNFT2Q96EX2 444 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 STAMBPL1Q96FJ0 436 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF570Q96NI8 536 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms