RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 PLCL1Q15111 1095 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 INO80DQ53TQ3 878 aaPredicted RBP7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 E4F1Q66K89 784 aaPredicted RBP7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 ANKS6Q68DC2 871 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 PNCKQ6P2M8 343 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 DPPA4Q7L190 304 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 TMEM135Q86UB9 458 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 HEATR4Q86WZ0 1026 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 GKN2Q86XP6 184 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 ZNF564Q8TBZ8 553 aaPredicted RBP7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 THAP3Q8WTV1 239 aaPredicted RBP7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 ART4Q93070 314 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 ARHGEF26Q96DR7 871 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 CCDC34Q96HJ3 373 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 FAM81BQ96LP2 452 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 ALPK1Q96QP1 1244 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 AGAP2Q99490 1192 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 G6PC3Q9BUM1 346 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 STK33Q9BYT3 514 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 STRADBQ9C0K7 418 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 HSD3B7Q9H2F3 369 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 ZFP64Q9NPA5 681 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 ZNF71Q9NQZ8 489 aaPredicted RBP7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 ETNK2Q9NVF9 386 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 TAAR2Q9P1P5 351 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 UBA2Q9UBT2 640 aaPredicted RBP7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 MAN2B2Q9Y2E5 1009 aa7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 HEMK1Q9Y5R4 338 aaPredicted RBP7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 MRPS18BQ9Y676 258 aaKnown RBP7.84□□□□□ -1.15
PPP4R1-225ENST00000583438 NOTCH2Q04721 2471 aa7.84□□□□□ -1.16
PPP4R1-225ENST00000583438 TRAV20A0A0B4J274 112 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 LOC100996750A0A140TA64 210 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 NPIPB15A6NHN6 443 aaPredicted RBP7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 TOR1BO14657 336 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 TEX33O43247 280 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 PRODHO43272 600 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 NUDT21O43809 227 aaKnown RBP7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 SNRNP200O75643 2136 aaKnown RBP7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 CPNE6O95741 557 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 TNFP01375 233 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 RNASE1P07998 156 aaKnown RBP7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 ZGLP1P0C6A0 271 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 CCNB1P14635 433 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 PNLIPP16233 465 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 GPD1P21695 349 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 HOXC12P31275 282 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 SOX5P35711 763 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 UQCRFS1P47985 274 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 BLKP51451 505 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 LIMK2P53671 638 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 GFRA1P56159 465 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 POLR2FP61218 127 aaKnown RBP7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 SLC10A7Q0GE19 358 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 ELP6Q0PNE2 266 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 KCNAB2Q13303 367 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 PRSS53Q2L4Q9 553 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 MAP9Q49MG5 647 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 SLC30A9Q6PML9 568 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 APTXQ7Z2E3 356 aaKnown RBP7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 SLFN11Q7Z7L1 901 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 SRLQ86TD4 932 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 PHF13Q86YI8 300 aaPredicted RBP7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 TMEM52Q8NDY8 209 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 MCEEQ96PE7 176 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 CTRCQ99895 268 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 TEX101Q9BY14 249 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 KRTAP4-6Q9BYQ5 205 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 DPEP2Q9H4A9 486 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 FAM207AQ9NSI2 230 aaPredicted RBP7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 MBNL3Q9NUK0 354 aaKnown RBP7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 ERVK13-1Q9NX77 482 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 HOOK1Q9UJC3 728 aaKnown RBP7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 PILRAQ9UKJ1 303 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 SUFUQ9UMX1 484 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 PAXBP1Q9Y5B6 917 aa7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 OAS3Q9Y6K5 1087 aaKnown RBP7.83□□□□□ -1.16
PPP4R1-225ENST00000583438 TRBV23OR9-2A0A075B6M9 112 aa7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 ZSCAN5CA6NGD5 496 aaPredicted RBP7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 SIGLEC16A6NMB1 481 aa7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 TMEM110-MUSTN1A8MSY1 372 aa7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 FGF10O15520 208 aaPredicted RBP7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 HTRA2O43464 458 aaPredicted RBP7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 DLX3O60479 287 aa7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 PPFIA2O75334 1257 aa7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 HEXIM1O94992 359 aaKnown RBP7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 SCG5P05408 212 aa7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 THBDP07204 575 aa7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 SNRPB2P08579 225 aaKnown RBP7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 HOXC4P09017 264 aaPredicted RBP7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 ELFN1P0C7U0 828 aa7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 PRKAR1AP10644 381 aa7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 KRT3P12035 628 aa7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 MYCLP1P12525 358 aaPredicted RBP7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 ZNF28P17035 718 aa7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 IL1R2P27930 398 aa7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 ALDH4A1P30038 563 aa7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 ADCY8P40145 1251 aa7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 ECI1P42126 302 aa7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 GNPDA1P46926 289 aa7.82□□□□□ -1.16
PPP4R1-225ENST00000583438 GEMIN4P57678 1058 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms