RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	PDPK2P	Q6A1A2	396 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	FAM151B	Q6UXP7	276 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ZC3H18	Q86VM9	953 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	C9orf43	Q8TAL5	461 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	NAT14	Q8WUY8	206 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CCDC42	Q96M95	316 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	EFHD1	Q9BUP0	239 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	GOLPH3	Q9H4A6	298 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ZNF768	Q9H5H4	540 aa	Known RBP	11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	UCK1	Q9HA47	277 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	UGT1A7	Q9HAW7	530 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	UGT1A10	Q9HAW8	530 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	UGT1A8	Q9HAW9	530 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	SLC40A1	Q9NP59	571 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CROT	Q9UKG9	612 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	PSMD13	Q9UNM6	376 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	GPR89A	B7ZAQ6	455 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	VEGFD	O43915	354 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CST8	O60676	142 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	NDUFA10	O95299	355 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	FURIN	P09958	794 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	GPR89B	P0CG08	455 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	IDS	P22304	550 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CDKN2B	P42772	138 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CAPZB	P47756	277 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ADCY2	Q08462	1091 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	WASHC5	Q12768	1159 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TRIM14	Q14142	442 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ERV3-1	Q14264	604 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	PRKD1	Q15139	912 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CHRNA6	Q15825	494 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	SIRPB2	Q5JXA9	342 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	C6orf15	Q6UXA7	325 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	C11orf96	Q7Z7L8	435 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TMEM135	Q86UB9	458 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	VSIG1	Q86XK7	387 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	RHOT2	Q8IXI1	618 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	RHOT1	Q8IXI2	618 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TTC30B	Q8N4P2	665 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ESX1	Q8N693	406 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	GPR150	Q8NGU9	434 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	BLOC1S5	Q8TDH9	187 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TFB1M	Q8WVM0	346 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	APOBEC4	Q8WW27	367 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	STAMBPL1	Q96FJ0	436 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ABHD17A	Q96GS6	310 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TEKT5	Q96M29	485 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TTC25	Q96NG3	672 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TRIT1	Q9H3H1	467 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	POT1	Q9NUX5	634 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	DDX56	Q9NY93	547 aa	Known RBP	11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	KLHL8	Q9P2G9	620 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	FAM153A	Q9UHL3	310 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	LNPEP	Q9UIQ6	1025 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TUBD1	Q9UJT1	453 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	HECTD1	Q9ULT8	2610 aa		11.42	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	PRR19	A6NJB7	356 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	OR2AG2	A6NM03	316 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CBFA2T2	O43439	604 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	MFAP3L	O75121	409 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TIAF1	O95411	115 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TPM1	P09493	284 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	VCL	P18206	1134 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	SPAM1	P38567	509 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TNNT3	P45378	269 aa	Predicted RBP	11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CTSC	P53634	463 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	MC1R	Q01726	317 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	KCNAB1	Q14722	419 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	PTPRCAP	Q14761	206 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	PPP2R5E	Q16537	467 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	LRRC38	Q5VT99	294 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	KDELC1	Q6UW63	502 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ABRAXAS1	Q6UWZ7	409 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	DET1	Q7L5Y6	550 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	GLT6D1	Q7Z4J2	308 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	RASGEF1A	Q8N9B8	481 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	IPMK	Q8NFU5	416 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	MRGPRX2	Q96LB1	330 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	VPS35	Q96QK1	796 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	C10orf88	Q9H8K7	445 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	IL26	Q9NPH9	171 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	FAM8A1	Q9UBU6	413 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TFR2	Q9UP52	801 aa		11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CFAP20	Q9Y6A4	193 aa	Known RBP	11.41	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	RELN	P78509	3460 aa		11.4	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	SPEN	Q96T58	3664 aa	Known RBP	11.4	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	IGHV5-51	A0A0C4DH38	117 aa		11.4	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	LOC285095	A0A1B0GVY8	99 aa		11.4	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CDC14C	A4D256	554 aa		11.4	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114		K7EM74	188 aa		11.4	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	SPAG6	O75602	509 aa		11.4	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	POP7	O75817	140 aa	Known RBP	11.4	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	FOLR1	P15328	257 aa		11.4	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	AKT1	P31749	480 aa		11.4	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	HMGCL	P35914	325 aa		11.4	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CASR	P41180	1078 aa		11.4	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	HAL	P42357	657 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms