RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 TUFT1Q9NNX1 390 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 ATAD3AQ9NVI7 634 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 ARL8BQ9NVJ2 186 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 DNAJC17Q9NVM6 304 aaKnown RBP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 INTS13Q9NVM9 706 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 PLK2Q9NYY3 685 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 VSX1Q9NZR4 365 aaPredicted RBP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 COPG2Q9UBF2 871 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 HDAC6Q9UBN7 1215 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 HEY2Q9UBP5 337 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 ITGA11Q9UKX5 1188 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 SNX7Q9UNH6 387 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 SMC3Q9UQE7 1217 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 ZNF148Q9UQR1 794 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 FAM96BQ9Y3D0 163 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 STRAPQ9Y3F4 350 aaKnown RBP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 NOX1Q9Y5S8 564 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 WNT6Q9Y6F9 365 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 ACEP12821 1306 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 ATP7AQ04656 1500 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 KIF14Q15058 1648 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 AHDC1Q5TGY3 1603 aaPredicted RBP3.12□□□□□ -1.91
KPNB1-208ENST00000580019 ZC3H13Q5T200 1668 aaKnown RBP3.12□□□□□ -1.91
KPNB1-208ENST00000580019 NUP153P49790 1475 aaKnown RBP3.12□□□□□ -1.91
KPNB1-208ENST00000580019 PRAMEF33A0A0G2JMD5 474 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 LNP1A1A4G5 178 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 TMEM247A6NEH6 219 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 SDR42E2A6NKP2 422 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 LINC01548A6NM66 108 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 PRSS44E7EML9 344 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 H0YC42 278 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 H0YCG3 227 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 PES1O00541 588 aaKnown RBP3.12□□□□□ -1.91
KPNB1-208ENST00000580019 DSCR3O14972 297 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 SMAD9O15198 467 aaKnown RBP3.12□□□□□ -1.91
KPNB1-208ENST00000580019 CA12O43570 354 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 TMPRSS11DO60235 418 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 PRAMEF10O60809 474 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 DAB1O75553 588 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 CRCPO75575 148 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 NKX2-2O95096 273 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 CELF2O95319 508 aaKnown RBP3.12□□□□□ -1.91
KPNB1-208ENST00000580019 CBX6O95503 412 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 BCL10O95999 233 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 ADAP00813 363 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 RLN1P04808 185 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 MMP2P08253 660 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 FAM58BPP0C7Q3 252 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 PRG2P13727 222 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 SLC2A4P14672 509 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 PFKFB1P16118 471 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 ADRA2CP18825 462 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 IL4RP24394 825 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 EEF1B2P24534 225 aaKnown RBP3.12□□□□□ -1.91
KPNB1-208ENST00000580019 CCNCP24863 283 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 KLRC2P26717 231 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 DUSP1P28562 367 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 CCND2P30279 289 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 CDC25CP30307 473 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 FASLGP48023 281 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 CAMLGP49069 296 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 SUOXP51687 545 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 ACTR1AP61163 376 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 SUMO2P61956 95 aaKnown RBP3.12□□□□□ -1.91
KPNB1-208ENST00000580019 GFPT1Q06210 699 aaPredicted RBP3.12□□□□□ -1.91
KPNB1-208ENST00000580019 CCDC15Q0P6D6 951 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 BMPR2Q13873 1038 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 DPYSQ14117 519 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 SGCBQ16585 318 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 KRT24Q2M2I5 525 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 COL28A1Q2UY09 1125 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 RABL6Q3YEC7 729 aaPredicted RBP3.12□□□□□ -1.91
KPNB1-208ENST00000580019 FBXO43Q4G163 708 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 SOWAHCQ53LP3 525 aaPredicted RBP3.12□□□□□ -1.91
KPNB1-208ENST00000580019 CXorf66Q5JRM2 361 aaPredicted RBP3.12□□□□□ -1.91
KPNB1-208ENST00000580019 FAM102AQ5T9C2 384 aaPredicted RBP3.12□□□□□ -1.91
KPNB1-208ENST00000580019 KLHL10Q6JEL2 608 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 SLC25A24Q6NUK1 477 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 FBXL22Q6P050 247 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 NEK5Q6P3R8 708 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 CCBE1Q6UXH8 406 aaPredicted RBP3.12□□□□□ -1.91
KPNB1-208ENST00000580019 ISLR2Q6UXK2 745 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 TOM1L2Q6ZVM7 507 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 MOB3CQ70IA8 216 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 ARMC9Q7Z3E5 817 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 HAUS6Q7Z4H7 955 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 ABI3BPQ7Z7G0 1075 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 NEK8Q86SG6 692 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 CCDC13Q8IYE1 715 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 SCYL3Q8IZE3 742 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 KDM8Q8N371 416 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 SFRP1Q8N474 314 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 FAM109AQ8N4B1 249 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 PNPLA1Q8N8W4 532 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 KDM1BQ8NB78 822 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 C9orf43Q8TAL5 461 aaPredicted RBP3.12□□□□□ -1.91
KPNB1-208ENST00000580019 C2CD4CQ8TF44 421 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 EXT2Q93063 718 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 MIB2Q96AX9 1013 aa3.12□□□□□ -1.91
KPNB1-208ENST00000580019 TUBGCP3Q96CW5 907 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms