RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 PRDM8Q9NQV8 689 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 FKBPLQ9UIM3 349 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 ZNF148Q9UQR1 794 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 DRG1Q9Y295 367 aaKnown RBP14.61□□□□□ -0.07
SS18-212ENST00000579061 LOXL2Q9Y4K0 774 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 KCTD3Q9Y597 815 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 ITPR1Q14643 2758 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 PIKFYVEQ9Y2I7 2098 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 AHCTF1Q8WYP5 2266 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 IGHV5-10-1A0A0J9YXX1 117 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 PMS2P1A4D2B8 440 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 LILRA5A6NI73 299 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 GPR39O43194 453 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 JMJD7P0C870 316 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 MSH3P20585 1137 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 CA5AP35218 305 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 NFATC2Q13469 925 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 SIX1Q15475 284 aaPredicted RBP14.6□□□□□ -0.07
SS18-212ENST00000579061 LONRF2Q1L5Z9 754 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 PLA2G4EQ3MJ16 856 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 GPR33Q49SQ1 333 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 PHF19Q5T6S3 580 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 TMEM220Q6QAJ8 160 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 WDR74Q6RFH5 385 aaPredicted RBP14.6□□□□□ -0.07
SS18-212ENST00000579061 AMZ2Q86W34 360 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 SPACA3Q8IXA5 215 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 OR13C4Q8NGS5 318 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 HEXDCQ8WVB3 486 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 C1orf54Q8WWF1 131 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 AHCYL2Q96HN2 611 aaKnown RBP14.6□□□□□ -0.07
SS18-212ENST00000579061 PDP2Q9P2J9 529 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 ACSL6Q9UKU0 697 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 DNAJC16Q9Y2G8 782 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 ZFHX4Q86UP3 3567 aa14.6□□□□□ -0.07
SS18-212ENST00000579061 NBEAQ8NFP9 2946 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 ZFYVE26Q68DK2 2539 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 PDZK1P1A8MUH7 402 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 NVLO15381 856 aaKnown RBP14.59□□□□□ -0.07
SS18-212ENST00000579061 SUN1O94901 812 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 VIPP01282 170 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 IFNB1P01574 187 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 THRAP10827 490 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 ITGALP20701 1170 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 PSMA3P25788 255 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 ITPKBP27987 946 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 AKT1P31749 480 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 CSF2RBP32927 897 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 SLC19A1P41440 591 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 CTSCP53634 463 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 CFHR1Q03591 330 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 CCDC173Q0VFZ6 552 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 NKAIN2Q5VXU1 208 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 SNX20Q7Z614 316 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 RBM12BQ8IXT5 1001 aaKnown RBP14.59□□□□□ -0.07
SS18-212ENST00000579061 STYXQ8WUJ0 223 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 KCNE4Q8WWG9 221 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 ETNK1Q9HBU6 452 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 POT1Q9NUX5 634 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 NLE1Q9NVX2 485 aaPredicted RBP14.59□□□□□ -0.07
SS18-212ENST00000579061 SCHIP1Q9P0W5 487 aaPredicted RBP14.59□□□□□ -0.07
SS18-212ENST00000579061 PAK5Q9P286 719 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 ZNF624Q9P2J8 865 aaPredicted RBP14.59□□□□□ -0.07
SS18-212ENST00000579061 CRLS1Q9UJA2 301 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 SLC30A1Q9Y6M5 507 aa14.59□□□□□ -0.07
SS18-212ENST00000579061 TRBV5-4A0A0C4DH59 114 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 GOLGA6L3A6NEY3 463 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 CFAP99D6REC4 459 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 POP7O75817 140 aaKnown RBP14.58□□□□□ -0.08
SS18-212ENST00000579061 GAS8O95995 478 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 FGGP02679 453 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 RALBP11234 206 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 HOXB3P14651 431 aaPredicted RBP14.58□□□□□ -0.08
SS18-212ENST00000579061 BRAFP15056 766 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 SLC5A2P31639 672 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 HALP42357 657 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 UCNP55089 124 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 TLE3Q04726 772 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 CDH17Q12864 832 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 SEMA5AQ13591 1074 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 SNX1Q13596 522 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 LAMB3Q13751 1172 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 C16orf72Q14CZ0 275 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 BCL7AQ4VC05 210 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 C4orf22Q6V702 233 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 TMEM26Q6ZUK4 368 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 ZNF761Q86XN6 746 aaPredicted RBP14.58□□□□□ -0.08
SS18-212ENST00000579061 TRIM48Q8IWZ4 208 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 NXPE1Q8N323 547 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 CCDC89Q8N998 374 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 AGBL5Q8NDL9 886 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 DNAJC1Q96KC8 554 aaKnown RBP14.58□□□□□ -0.08
SS18-212ENST00000579061 LINC00615Q96LM1 132 aaPredicted RBP14.58□□□□□ -0.08
SS18-212ENST00000579061 CCDC74BQ96LY2 380 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 HOMER3Q9NSC5 361 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 PISDQ9UG56 409 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 SSUH2Q9Y2M2 353 aa14.58□□□□□ -0.08
SS18-212ENST00000579061 MGAT4DA6NG13 374 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 MROH6A6NGR9 719 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 OR2AG2A6NM03 316 aa14.57□□□□□ -0.08
SS18-212ENST00000579061 E7EVH7 732 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms