RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 KLK6Q92876 244 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 SCAMP4Q969E2 229 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 TCEAL3Q969E4 200 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 PPP1R16AQ96I34 528 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 COX14Q96I36 57 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 ZNF778Q96MU6 729 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 PWWP2AQ96N64 755 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 RANBP9Q96S59 729 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 OMDQ99983 421 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 TBL1YQ9BQ87 522 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 WRAP53Q9BUR4 548 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 TEX101Q9BY14 249 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 SLC17A9Q9BYT1 436 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 ABCG8Q9H221 673 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 SEMA4AQ9H3S1 761 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 SMOC1Q9H4F8 434 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 LRRC40Q9H9A6 602 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 TM9SF3Q9HD45 589 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 FSCN3Q9NQT6 498 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 HOMER3Q9NSC5 361 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 TREX1Q9NSU2 369 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 ZDHHC18Q9NUE0 388 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 PIH1D1Q9NWS0 290 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 PAK5Q9P286 719 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 EIF2B4Q9UI10 523 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 ZNF148Q9UQR1 794 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 DMTF1Q9Y222 760 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 AAR2Q9Y312 384 aaKnown RBP3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 PCDHGA5Q9Y5G8 931 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 AKAP13Q12802 2813 aa3.77□□□□□ -1.81
SMARCE1-215ENST00000578995 PTPRZ1P23471 2315 aaPredicted RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 NUP210LQ5VU65 1888 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 IGLV3-16A0A075B6K0 115 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TBC1D3DA0A087WVF3 549 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TBC1D3IA0A087WXS9 549 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TBC1D3EA0A087X179 549 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TBC1D3KA0A087X1G2 549 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 ZCWPW2A0A1B0GU75 182 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TBC1D3FA6NER0 549 aaPredicted RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 A6NHS1 94 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 LRRC72A6NJI9 287 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 A8MX80 341 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TBC1D3LB9A6J9 549 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 KIF2AO00139 706 aaPredicted RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 VILLO15195 856 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 BUD23O43709 281 aaKnown RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 PRMT3O60678 531 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 LRP3O75074 770 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 AVILO75366 819 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 BANF1O75531 89 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TM7SF2O76062 418 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 URI1O94763 535 aaPredicted RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 FSBPO95073 299 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 PAK4O96013 591 aaPredicted RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 IFNB1P01574 187 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 APRTP07741 180 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 RETP07949 1114 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 HOXC4P09017 264 aaPredicted RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TBC1D3HP0C7X1 549 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 ZNF806P0C7X5 589 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 PRSS56P0CW18 603 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 ACADMP11310 421 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 MLNP12872 115 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TPH1P17752 444 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 HNRNPA2B1P22626 353 aaKnown RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 MAT2AP31153 395 aaKnown RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 FOXN2P32314 431 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 NUDT1P36639 197 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 ETV3P41162 512 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 ARCN1P48444 511 aaKnown RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 VPS41P49754 854 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 NXPH1P58417 271 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 KIAA1024LP59773 190 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 POLR2LP62875 67 aaKnown RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 RACK1P63244 317 aaKnown RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 CDK16Q00536 496 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 B4GALNT1Q00973 533 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 DR1Q01658 176 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 GUCY2DQ02846 1103 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 ITKQ08881 620 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 GRIK2Q13002 908 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 GPS1Q13098 491 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 EIF2B5Q13144 721 aaKnown RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 MTM1Q13496 603 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 FZD2Q14332 565 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 SEMA3AQ14563 771 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 FASTKD3Q14CZ7 662 aaKnown RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 SF3A2Q15428 464 aaKnown RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TAF1AQ15573 450 aaPredicted RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 CCDC6Q16204 474 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 CSRP2Q16527 193 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 OCLNQ16625 522 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 SETMARQ53H47 684 aaPredicted RBP3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 FNBP1LQ5T0N5 605 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 CERCAMQ5T4B2 595 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TBC1D3GQ6DHY5 549 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 TBC1D3CQ6IPX1 549 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 LRRC8BQ6P9F7 803 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 C4orf22Q6V702 233 aa3.76□□□□□ -1.81
SMARCE1-215ENST00000578995 ARHGEF18Q6ZSZ5 1173 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms