RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 SMYD2Q9NRG4 433 aa4.88□□□□□ -1.63
IFT20-205ENST00000578009 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.88□□□□□ -1.63
IFT20-205ENST00000578009 SYBUQ9NX95 663 aa4.88□□□□□ -1.63
IFT20-205ENST00000578009 SIRPGQ9P1W8 387 aa4.88□□□□□ -1.63
IFT20-205ENST00000578009 ZNF212Q9UDV6 495 aa4.88□□□□□ -1.63
IFT20-205ENST00000578009 SFMBT1Q9UHJ3 866 aa4.88□□□□□ -1.63
IFT20-205ENST00000578009 PHTF1Q9UMS5 762 aa4.88□□□□□ -1.63
IFT20-205ENST00000578009 ASB3Q9Y575 518 aa4.88□□□□□ -1.63
IFT20-205ENST00000578009 SNX10Q9Y5X0 201 aa4.88□□□□□ -1.63
IFT20-205ENST00000578009 USH1CQ9Y6N9 552 aa4.88□□□□□ -1.63
IFT20-205ENST00000578009 RPS6KL1Q9Y6S9 549 aa4.88□□□□□ -1.63
IFT20-205ENST00000578009 PATJQ8NI35 1801 aa4.88□□□□□ -1.63
IFT20-205ENST00000578009 PTPRDP23468 1912 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 SLC12A8A0AV02 714 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 ZNF840PA6NDX5 716 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 CFAP73A6NFT4 308 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 DFFAO00273 331 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 KIAA0355O15063 1070 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 MSI1O43347 362 aaKnown RBP4.87□□□□□ -1.63
IFT20-205ENST00000578009 KLF4O43474 513 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 ACSL4O60488 711 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 TLR5O60602 858 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 HNRNPCL1O60812 293 aaKnown RBP4.87□□□□□ -1.63
IFT20-205ENST00000578009 PRAMEF11O60813 436 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 GLRA3O75311 464 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 CLDN11O75508 207 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 DCTN3O75935 186 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 DNAJC8O75937 253 aaPredicted RBP4.87□□□□□ -1.63
IFT20-205ENST00000578009 NEBLO76041 1014 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 BAIAP3O94812 1187 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 C1RP00736 705 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 APOA4P06727 396 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 HMGA1P17096 107 aaKnown RBP4.87□□□□□ -1.63
IFT20-205ENST00000578009 LAG3P18627 525 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 ADRA1DP25100 572 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 CD38P28907 300 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 OR1D2P34982 312 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 PPM1AP35813 382 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 SLC11A2P49281 568 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 HARS2P49590 506 aaKnown RBP4.87□□□□□ -1.63
IFT20-205ENST00000578009 GPR15P49685 360 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 GATMP50440 423 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 LIMK2P53671 638 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 CDH4P55283 916 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 PDE1BQ01064 536 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 BNIP1Q12981 228 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 SERINC3Q13530 473 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 RFTN1Q14699 578 aaPredicted RBP4.87□□□□□ -1.63
IFT20-205ENST00000578009 MGAT5BQ3V5L5 792 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 PABPC1LQ4VXU2 614 aaKnown RBP4.87□□□□□ -1.63
IFT20-205ENST00000578009 RABGAP1LQ5R372 815 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 HECTD3Q5T447 861 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 SYCP2LQ5T4T6 812 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 TEDDM1Q5T9Z0 273 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 RNF187Q5TA31 235 aaPredicted RBP4.87□□□□□ -1.63
IFT20-205ENST00000578009 MARC1Q5VT66 337 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 FAM91A1Q658Y4 838 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 KIAA1841Q6NSI8 718 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 CGB2Q6NT52 195 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 KDELC1Q6UW63 502 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 ZNF783Q6ZMS7 281 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 KIAA0408Q6ZU52 694 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 SPATC1Q76KD6 591 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 CHST9Q7L1S5 443 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 RTL10Q7L3V2 364 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 OTOAQ7RTW8 1153 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 TAS1R1Q7RTX1 841 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 CCDC91Q7Z6B0 441 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 GALNT7Q86SF2 657 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 CNTN4Q8IWV2 1026 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 LMNTD2Q8IXW0 634 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 TCEAL8Q8IYN2 117 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 NDUFAF2Q8N183 169 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 SLC39A11Q8N1S5 342 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 CCDC33Q8N5R6 958 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 STKLD1Q8NE28 680 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 CPT1CQ8TCG5 803 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 IMP4Q96G21 291 aaKnown RBP4.87□□□□□ -1.63
IFT20-205ENST00000578009 SCLYQ96I15 445 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 CELF6Q96J87 481 aaKnown RBP4.87□□□□□ -1.63
IFT20-205ENST00000578009 C7orf26Q96N11 449 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 RBBP8Q99708 897 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 PAIP2Q9BPZ3 127 aaKnown RBP4.87□□□□□ -1.63
IFT20-205ENST00000578009 TBL1YQ9BQ87 522 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 CLSTN3Q9BQT9 956 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 SIKE1Q9BRV8 207 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 TRIM55Q9BYV6 548 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 KIF9Q9HAQ2 790 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 SAR1AQ9NR31 198 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 RBM22Q9NW64 420 aaKnown RBP eCLIP4.87□□□□□ -1.63
IFT20-205ENST00000578009 SPG21Q9NZD8 308 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 TRPM5Q9NZQ8 1165 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 TXNDC16Q9P2K2 825 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 SLC17A7Q9P2U7 560 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 NCDNQ9UBB6 729 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 UXTQ9UBK9 157 aaPredicted RBP4.87□□□□□ -1.63
IFT20-205ENST00000578009 STOML2Q9UJZ1 356 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 RIMKLBQ9ULI2 386 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 SLC12A4Q9UP95 1085 aa4.87□□□□□ -1.63
IFT20-205ENST00000578009 SORCS3Q9UPU3 1222 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms