RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 EPXP11678 715 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 ADSLP30566 484 aaPredicted RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 FMO4P31512 558 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 KCNC1P48547 511 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 CLK1P49759 484 aaKnown RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 FLT3LGP49771 235 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 SCNN1BP51168 640 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 MECP2P51608 486 aaKnown RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 TAF10Q12962 218 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 TRIM25Q14258 630 aaKnown RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 MS4A13Q5J8X5 152 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 OGFRL1Q5TC84 451 aaPredicted RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 MZT2AQ6P582 158 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 KDELC1Q6UW63 502 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 CILP2Q8IUL8 1156 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 CNTN4Q8IWV2 1026 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 CPSF7Q8N684 471 aaKnown RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 TRIML2Q8N7C3 387 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 DLG3Q92796 817 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 IMP4Q96G21 291 aaKnown RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 DPH2Q9BQC3 489 aaPredicted RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 SLC25A23Q9BV35 468 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 FBXO44Q9H4M3 255 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 NOL6Q9H6R4 1146 aaKnown RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 SEMA4BQ9NPR2 832 aaPredicted RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 UTP6Q9NYH9 597 aaKnown RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 Q9Y3F1 56 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 ACTL7AQ9Y615 435 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 V9GYQ6 96 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 CCDC162PA2VCL2 907 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 NT5C1B-RDH14C9J2C7 533 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 CD3EAPO15446 510 aaKnown RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 SLC7A4O43246 635 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 ZNF623O75123 536 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 NDUFS3O75489 264 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 TIPRLO75663 272 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 BCAS2O75934 225 aaPredicted RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 SNUPNO95149 360 aaKnown RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 LINC00032P0C843 101 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 PSMC3P17980 439 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 HOXC13P31276 330 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 GRIA3P42263 894 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 POLD2P49005 469 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 GFRA1P56159 465 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 PFKPQ01813 784 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 MAP7Q14244 749 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 HERC3Q15034 1050 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 ACAP2Q15057 778 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 PLBD1Q6P4A8 553 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 MRPL10Q7Z7H8 261 aaKnown RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 LRRC49Q8IUZ0 686 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 MFN1Q8IWA4 741 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 LGI2Q8N0V4 545 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 BBS5Q8N3I7 341 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 DCBLD1Q8N8Z6 715 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 PCYOX1LQ8NBM8 494 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 OR7D4Q8NG98 312 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 OR13J1Q8NGT2 312 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 SH3RF2Q8TEC5 729 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 ESAMQ96AP7 390 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 SLC45A3Q96JT2 553 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 CYP2S1Q96SQ9 504 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 CIB1Q99828 191 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 ARHGAP39Q9C0H5 1083 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 SPAG4Q9NPE6 437 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 VPS45Q9NRW7 570 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 ZDHHC7Q9NXF8 308 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 PCDHGB4Q9UN71 923 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 TIMM22Q9Y584 194 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 PCDHGB5Q9Y5G0 923 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 ANKRD34BA5PLL1 514 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 MANSC4A6NHS7 340 aaPredicted RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 M0QZQ0 153 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 CACNG3O60359 315 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 B4GALT3O60512 393 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 SEC24DO94855 1032 aaPredicted RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 IGLV3-25P01717 112 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 CYP11A1P05108 521 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 SERPINF2P08697 491 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 FAM58BPP0C7Q3 252 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 ELNP15502 786 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 CKMT2P17540 419 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 LEPRP48357 1165 aaKnown RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 ECT2LQ008S8 904 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 PLIN5Q00G26 463 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 GSTM4Q03013 218 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 C19orf57Q0VDD7 668 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 CAPRIN1Q14444 709 aaKnown RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 FUT11Q495W5 492 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 VPS26BQ4G0F5 336 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 MTX3Q5HYI7 312 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 MANEALQ5VSG8 457 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 FAM45BPQ6NSW5 357 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 CD300LGQ6UXG3 332 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 RBM44Q6ZP01 1051 aaKnown RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 DHFR2Q86XF0 187 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 HERC6Q8IVU3 1022 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 ARHGEF39Q8N4T4 335 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 ADCY4Q8NFM4 1077 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 RIN3Q8TB24 985 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms