RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 TPM2P07951 284 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 FERP16591 822 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 IDSP22304 550 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 PCK1P35558 622 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 ARL4DP49703 201 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 UBXN1Q04323 297 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 MMRN1Q13201 1228 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 GPR19Q15760 415 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 KHDC1Q4VXA5 237 aaKnown RBP9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 IZUMO3Q5VZ72 239 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 FBXO38Q6PIJ6 1188 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 ZNF517Q6ZMY9 492 aaPredicted RBP9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 LRRTM4Q86VH4 590 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 BPHLQ86WA6 291 aaPredicted RBP9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 ZBTB2Q8N680 514 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 ENDOVQ8N8Q3 282 aaKnown RBP9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 TTC13Q8NBP0 860 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 UBXN4Q92575 508 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 CXorf40BQ96DE9 158 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 ZNF514Q96K75 400 aaPredicted RBP9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 PCDH18Q9HCL0 1135 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 WASH6PQ9NQA3 447 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 KCND1Q9NSA2 647 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 MYO1AQ9UBC5 1043 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 DNPEPQ9ULA0 475 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 SNX7Q9UNH6 387 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 SHOC2Q9UQ13 582 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 CSMD2Q7Z408 3487 aa9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 MDC1Q14676 2089 aaKnown RBP9.91□□□□□ -0.82
NPLOC4-220ENST00000576940 ZFHX3Q15911 3703 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 SSU72P8A0A1W2PR75 194 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 ARHGAP10A1A4S6 786 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 CPNE3O75131 537 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 KRT38O76015 456 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 CDK14O94921 469 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 JCHAINP01591 159 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 HLA-DQB2P05538 268 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 KLK3P07288 261 aaPredicted RBP9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 MMP2P08253 660 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 CD48P09326 243 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 PIRTP0C851 137 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 SPTBP11277 2137 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 ATP1A3P13637 1013 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 CES1P23141 567 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 VARSP26640 1264 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 CA5AP35218 305 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 SERPINB6P35237 376 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 ZNF165P49910 485 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 RPL26P61254 145 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 CDK18Q07002 472 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 GALNT3Q14435 633 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 ZRANB3Q5FWF4 1079 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 ZNF569Q5MCW4 686 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 PLEKHS1Q5SXH7 462 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 CCDC122Q5T0U0 273 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 ALG1LQ6GMV1 187 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 CYB5D1Q6P9G0 228 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 TMEM126BQ8IUX1 230 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 GPR150Q8NGU9 434 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 MAML1Q92585 1016 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 GLYATL1Q969I3 302 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 ZNF501Q96CX3 271 aaPredicted RBP9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 PPM1MQ96MI6 270 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 SMAD5Q99717 465 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 ZFYVE1Q9HBF4 777 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 GPR83Q9NYM4 423 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 TCFL5Q9UL49 500 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 TMPRSS11EQ9UL52 423 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 RPL26L1Q9UNX3 145 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 FBN2P35556 2912 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 POLQO75417 2590 aa9.9□□□□□ -0.82
NPLOC4-220ENST00000576940 UBA6A0AVT1 1052 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 MEN1O00255 615 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 MFSD11O43934 449 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 LCA5LO95447 670 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 SLC4A1P02730 911 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 CAPN1P07384 714 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 CCDC172P0C7W6 258 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 FECHP22830 423 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 CD86P42081 329 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 VAV2P52735 878 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 TUBB4BP68371 445 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 HSD11B2P80365 405 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 GALNT2Q10471 571 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 TMEM115Q12893 351 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 TUBB2AQ13885 445 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 ELOAQ14241 798 aaKnown RBP9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 KRT81Q14533 505 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 ATP13A4Q4VNC1 1196 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 CT47A1Q5JQC4 288 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 AGAP9Q5VTM2 703 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 SP5Q6BEB4 398 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 WASH2PQ6VEQ5 465 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 MED25Q71SY5 747 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 ZNF571Q7Z3V5 609 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 TMC3Q7Z5M5 1100 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 C11orf96Q7Z7L8 435 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 LRRC49Q8IUZ0 686 aa9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 RBM12BQ8IXT5 1001 aaKnown RBP9.89□□□□□ -0.83
NPLOC4-220ENST00000576940 IQCKQ8N0W5 287 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms