RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	SLC18A1	P54219	525 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	PDAP1	Q13442	181 aa	Known RBP	11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	INSC	Q1MX18	579 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	TAF1B	Q53T94	588 aa	Predicted RBP	11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	KCTD16	Q68DU8	428 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	TMEM220	Q6QAJ8	160 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	TSSK4	Q6SA08	328 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	KYAT3	Q6YP21	454 aa	Known RBP	11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	GCNT7	Q6ZNI0	430 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	RAPH1	Q70E73	1250 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	IQCH	Q86VS3	1027 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	CEP97	Q8IW35	865 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	RASGEF1A	Q8N9B8	481 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	BANP	Q8N9N5	519 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	GAB3	Q8WWW8	586 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	DNASE2B	Q8WZ79	361 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	INPP5D	Q92835	1189 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	ZBTB9	Q96C00	473 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	SGF29	Q96ES7	293 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	CCDC97	Q96F63	343 aa	Predicted RBP	11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	LINC00615	Q96LM1	132 aa	Predicted RBP	11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	OLFM1	Q99784	485 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	ORAI3	Q9BRQ5	295 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	CCM2	Q9BSQ5	444 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	LGR4	Q9BXB1	951 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	OR2AG1	Q9H205	316 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	CAB39L	Q9H9S4	337 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	GPAM	Q9HCL2	828 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	FZD3	Q9NPG1	666 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	DCDC2	Q9UHG0	476 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	SMG5	Q9UPR3	1016 aa	Known RBP	11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	SLC17A4	Q9Y2C5	497 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	OR1A2	Q9Y585	309 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	OAS3	Q9Y6K5	1087 aa	Known RBP	11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	EML5	Q05BV3	1969 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	DOCK9	Q9BZ29	2069 aa		11.74	□□□□□ -0.53
PRPF8-212	ENST00000575116	CCDC189	A1A4V9	331 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	FOXO6	A8MYZ6	492 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116		H3BQF6	201 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	EIF3F	O00303	357 aa	Predicted RBP	11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	KMO	O15229	486 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	PRPF4	O43172	522 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	KCNJ13	O60928	360 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	LILRB5	O75023	590 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	NIPSNAP2	O75323	286 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	WISP3	O95389	354 aa	Predicted RBP	11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	SLC35E2B	P0CK96	405 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	CBSL	P0DN79	551 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	BRAF	P15056	766 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	BCKDHB	P21953	392 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	AOAH	P28039	575 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	HTR1B	P28222	390 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	CRHR1	P34998	444 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	CBS	P35520	551 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	CLCN7	P51798	805 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	CLDN2	P57739	230 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	RACK1	P63244	317 aa	Known RBP	11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	PLOD1	Q02809	727 aa	Predicted RBP	11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	OVGP1	Q12889	678 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	PDE1C	Q14123	709 aa	Predicted RBP	11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	PTK2B	Q14289	1009 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	NFATC4	Q14934	902 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	WDR45B	Q5MNZ6	344 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	PLEKHS1	Q5SXH7	462 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	ZNF648	Q5T619	568 aa	Predicted RBP	11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	LPCAT2	Q7L5N7	544 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	CMC1	Q7Z7K0	106 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	NKAP	Q8N5F7	415 aa	Known RBP	11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	MFSD2A	Q8NA29	543 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	SCARF2	Q96GP6	870 aa	Predicted RBP	11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	PDLIM5	Q96HC4	596 aa	Known RBP	11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	UBXN10	Q96LJ8	280 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	WDR92	Q96MX6	357 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	GPR21	Q99679	349 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	TRMT6	Q9UJA5	497 aa	Known RBP	11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	GRID1	Q9ULK0	1009 aa		11.73	□□□□□ -0.53
PRPF8-212	ENST00000575116	OR2AG2	A6NM03	316 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	IQCF5	A8MTL0	148 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	MEI4	A8MW99	385 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	COPE	O14579	308 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	PHGDH	O43175	533 aa	Known RBP	11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	GRID2	O43424	1007 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	TYROBP	O43914	113 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	DNAJC6	O75061	913 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	GLRA3	O75311	464 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	TRIM16	O95361	564 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	CEACAM5	P06731	702 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	LTA4H	P09960	611 aa	Known RBP	11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	ZNF37A	P17032	561 aa	Predicted RBP	11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	ZNF8	P17098	575 aa	Predicted RBP	11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	DGKA	P23743	735 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	CTSC	P53634	463 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	IL2	P60568	153 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	FAM83E	Q2M2I3	478 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	TSNAXIP1	Q2TAA8	658 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	TTLL9	Q3SXZ7	439 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	PPM1J	Q5JR12	505 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	LRRC8E	Q6NSJ5	796 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116		Q6ZSR6	202 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	DET1	Q7L5Y6	550 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms