RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 ZNF248Q8NDW4 579 aa10.49□□□□□ -0.73
LITAF-216ENST00000574848 FAM46DQ8NEK8 389 aa10.49□□□□□ -0.73
LITAF-216ENST00000574848 WDR36Q8NI36 951 aaKnown RBP10.49□□□□□ -0.73
LITAF-216ENST00000574848 HTR3CQ8WXA8 447 aa10.49□□□□□ -0.73
LITAF-216ENST00000574848 CPT1BQ92523 772 aa10.49□□□□□ -0.73
LITAF-216ENST00000574848 SCAMP4Q969E2 229 aa10.49□□□□□ -0.73
LITAF-216ENST00000574848 SLC46A1Q96NT5 459 aa10.49□□□□□ -0.73
LITAF-216ENST00000574848 OR2M4Q96R27 311 aa10.49□□□□□ -0.73
LITAF-216ENST00000574848 GFM1Q96RP9 751 aaKnown RBP10.49□□□□□ -0.73
LITAF-216ENST00000574848 AGAP2Q99490 1192 aa10.49□□□□□ -0.73
LITAF-216ENST00000574848 MLPHQ9BV36 600 aaPredicted RBP10.49□□□□□ -0.73
LITAF-216ENST00000574848 EPB41L4BQ9H329 900 aa10.49□□□□□ -0.73
LITAF-216ENST00000574848 LRRN3Q9H3W5 708 aa10.49□□□□□ -0.73
LITAF-216ENST00000574848 THSD1Q9NS62 852 aa10.49□□□□□ -0.73
LITAF-216ENST00000574848 TAAR2Q9P1P5 351 aa10.49□□□□□ -0.73
LITAF-216ENST00000574848 CD84Q9UIB8 345 aa10.49□□□□□ -0.73
LITAF-216ENST00000574848 SATB2Q9UPW6 733 aa10.49□□□□□ -0.73
LITAF-216ENST00000574848 SSUH2Q9Y2M2 353 aa10.49□□□□□ -0.73
LITAF-216ENST00000574848 RNF215Q9Y6U7 377 aa10.49□□□□□ -0.73
LITAF-216ENST00000574848 PTPRQQ9UMZ3 2332 aa10.49□□□□□ -0.73
LITAF-216ENST00000574848 CACNA1GO43497 2377 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 TLDC2A0PJX2 215 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 TMX2-CTNND1H3BSU7 103 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 FGF1P05230 155 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 RPLP0P05388 317 aaKnown RBP10.48□□□□□ -0.73
LITAF-216ENST00000574848 ITGA2BP08514 1039 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 ETS1P14921 441 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 TPSB2P20231 275 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 PTPN3P26045 913 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 ITPKBP27987 946 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 MAGEA6P43360 314 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 GNPDA1P46926 289 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 PPP2R2AP63151 447 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 CCL7P80098 99 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 CDK16Q00536 496 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 CTBSQ01459 385 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 TLE3Q04726 772 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 ZFP36L1Q07352 338 aaKnown RBP10.48□□□□□ -0.73
LITAF-216ENST00000574848 PDIA2Q13087 525 aaKnown RBP10.48□□□□□ -0.73
LITAF-216ENST00000574848 CBLBQ13191 982 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 TPSAB1Q15661 275 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 KYNUQ16719 465 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 KLHL38Q2WGJ6 581 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 PYCR3Q53H96 274 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 TEX44Q53QW1 395 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 C3orf38Q5JPI3 329 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 PDPK2PQ6A1A2 396 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 LRRC69Q6ZNQ3 347 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 B3GNT8Q7Z7M8 397 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 SLITRK4Q8IW52 837 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 SFTPA2Q8IWL1 248 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 SPACA3Q8IXA5 215 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 ZBED8Q8IZ13 594 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.48□□□□□ -0.73
LITAF-216ENST00000574848 ZDHHC1Q8WTX9 485 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 PYROXD1Q8WU10 500 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 EID2BQ96D98 161 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 LRRC39Q96DD0 335 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 TEKT5Q96M29 485 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 DCBLD2Q96PD2 775 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 VAT1Q99536 393 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 RIOK2Q9BVS4 552 aaKnown RBP10.48□□□□□ -0.73
LITAF-216ENST00000574848 CEP41Q9BYV8 373 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 DPEP2Q9H4A9 486 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 PRORYQ9H606 182 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 VPS37BQ9H9H4 285 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 GLOD4Q9HC38 313 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 MAGEE1Q9HCI5 957 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 RAB6BQ9NRW1 208 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 SPATS2LQ9NUQ6 558 aaKnown RBP10.48□□□□□ -0.73
LITAF-216ENST00000574848 PKD2L2Q9NZM6 624 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 FETUBQ9UGM5 382 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 MOSPD1Q9UJG1 213 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 ACSL6Q9UKU0 697 aa10.48□□□□□ -0.73
LITAF-216ENST00000574848 CNOT6Q9ULM6 557 aaKnown RBP10.48□□□□□ -0.73
LITAF-216ENST00000574848 NOVA2Q9UNW9 492 aaKnown RBP10.48□□□□□ -0.73
LITAF-216ENST00000574848 BPTFQ12830 3046 aa10.47□□□□□ -0.73
LITAF-216ENST00000574848 ZNF106Q9H2Y7 1883 aaKnown RBP10.47□□□□□ -0.73
LITAF-216ENST00000574848 EXOC1LA0A1B0GW35 172 aa10.47□□□□□ -0.73
LITAF-216ENST00000574848 FADS2P1A8MWK0 482 aa10.47□□□□□ -0.73
LITAF-216ENST00000574848 E7ESA3 106 aa10.47□□□□□ -0.73
LITAF-216ENST00000574848 SHOX2O60902 331 aaPredicted RBP10.47□□□□□ -0.73
LITAF-216ENST00000574848 DNAJC6O75061 913 aa10.47□□□□□ -0.73
LITAF-216ENST00000574848 SHBGP04278 402 aa10.47□□□□□ -0.73
LITAF-216ENST00000574848 GSTA2P09210 222 aa10.47□□□□□ -0.73
LITAF-216ENST00000574848 AK4P27144 223 aaPredicted RBP10.47□□□□□ -0.73
LITAF-216ENST00000574848 HPDP32754 393 aaPredicted RBP10.47□□□□□ -0.73
LITAF-216ENST00000574848 GPR3P46089 330 aa10.47□□□□□ -0.73
LITAF-216ENST00000574848 FASLGP48023 281 aa10.47□□□□□ -0.73
LITAF-216ENST00000574848 POLD2P49005 469 aa10.47□□□□□ -0.73
LITAF-216ENST00000574848 GYS2P54840 703 aa10.47□□□□□ -0.73
LITAF-216ENST00000574848 INHBCP55103 352 aa10.47□□□□□ -0.73
LITAF-216ENST00000574848 MAGOHP61326 146 aaKnown RBP10.47□□□□□ -0.73
LITAF-216ENST00000574848 B4GALNT1Q00973 533 aa10.47□□□□□ -0.73
LITAF-216ENST00000574848 CDK18Q07002 472 aa10.47□□□□□ -0.73
LITAF-216ENST00000574848 WASHC5Q12768 1159 aa10.47□□□□□ -0.73
LITAF-216ENST00000574848 GALNT3Q14435 633 aa10.47□□□□□ -0.73
LITAF-216ENST00000574848 KCNJ11Q14654 390 aa10.47□□□□□ -0.73
LITAF-216ENST00000574848 KIF26BQ2KJY2 2108 aa10.47□□□□□ -0.73
LITAF-216ENST00000574848 CCDC38Q502W7 563 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms