RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 ARFGAP1Q8N6T3 406 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 RBMXL3Q8N7X1 1067 aaKnown RBP11.71□□□□□ -0.53
CTNS-208ENST00000574218 TMEM102Q8N9M5 508 aaPredicted RBP11.71□□□□□ -0.53
CTNS-208ENST00000574218 OR8K5Q8NH50 307 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 MARVELD3Q96A59 401 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 SNRNP40Q96DI7 357 aaKnown RBP11.71□□□□□ -0.53
CTNS-208ENST00000574218 CSPG4P5Q96PW8 444 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 LYSMD1Q96S90 227 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 CD180Q99467 661 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 ZSCAN5AQ9BUG6 496 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 NUDT9Q9BW91 350 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 ILKAPQ9H0C8 392 aaPredicted RBP11.71□□□□□ -0.53
CTNS-208ENST00000574218 FANCEQ9HB96 536 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 RAD18Q9NS91 495 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.71□□□□□ -0.53
CTNS-208ENST00000574218 ETNK2Q9NVF9 386 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 ASF1BQ9NVP2 202 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 TMEM63CQ9P1W3 806 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 TRIM10Q9UDY6 481 aa11.71□□□□□ -0.53
CTNS-208ENST00000574218 FER1L5A0AVI2 2057 aa11.71□□□□□ -0.54
CTNS-208ENST00000574218 CCDC88CQ9P219 2028 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 ARHGAP10A1A4S6 786 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 TMEM191CA6NGB0 347 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 OR52A4PA6NMU1 304 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 SLC4A1P02730 911 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 ALPPP05187 535 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 PCK1P35558 622 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 DRG2P55039 364 aaKnown RBP11.7□□□□□ -0.54
CTNS-208ENST00000574218 ITGA1P56199 1179 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 CT47A1Q5JQC4 288 aaPredicted RBP11.7□□□□□ -0.54
CTNS-208ENST00000574218 CCDC122Q5T0U0 273 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 ZNF648Q5T619 568 aaPredicted RBP11.7□□□□□ -0.54
CTNS-208ENST00000574218 VWA5B1Q5TIE3 1220 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 IZUMO3Q5VZ72 239 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 PDPK2PQ6A1A2 396 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 ARMC6Q6NXE6 501 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 ABRAXAS1Q6UWZ7 409 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 ADGRG6Q86SQ4 1221 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 ZGRF1Q86YA3 2104 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 RAB43Q86YS6 212 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 CISD2Q8N5K1 135 aaKnown RBP11.7□□□□□ -0.54
CTNS-208ENST00000574218 ENDOVQ8N8Q3 282 aaKnown RBP11.7□□□□□ -0.54
CTNS-208ENST00000574218 CPT1BQ92523 772 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 GLYATL1Q969I3 302 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 ZNF653Q96CK0 615 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 CLIP3Q96DZ5 547 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 C19orf60Q96EN9 201 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 SLC41A2Q96JW4 573 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 WDR24Q96S15 920 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 ADGRE3Q9BY15 652 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 SLC7A5P2Q9GIP4 190 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 CHST8Q9H2A9 424 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 AKIRIN1Q9H9L7 192 aaPredicted RBP11.7□□□□□ -0.54
CTNS-208ENST00000574218 MRPL47Q9HD33 250 aaKnown RBP11.7□□□□□ -0.54
CTNS-208ENST00000574218 SLC40A1Q9NP59 571 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 KCND1Q9NSA2 647 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 RBM22Q9NW64 420 aaKnown RBP eCLIP11.7□□□□□ -0.54
CTNS-208ENST00000574218 SOHLH2Q9NX45 425 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 C5AR2Q9P296 337 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 AMACRQ9UHK6 382 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 POLQO75417 2590 aa11.7□□□□□ -0.54
CTNS-208ENST00000574218 CROCCQ5TZA2 2017 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 TLCD2A6NGC4 264 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 F5H423 210 aaPredicted RBP11.69□□□□□ -0.54
CTNS-208ENST00000574218 VEGFDO43915 354 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 CDK14O94921 469 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 CBX6O95503 412 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 RAB40ALP0C0E4 278 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 TUBB4BP68371 445 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 HSD11B2P80365 405 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 GPS2Q13227 327 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 RAPSNQ13702 412 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 TUBB2AQ13885 445 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 AGAP9Q5VTM2 703 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 WASH2PQ6VEQ5 465 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 CYP4V2Q6ZWL3 525 aaPredicted RBP11.69□□□□□ -0.54
CTNS-208ENST00000574218 TRAPPC5Q8IUR0 188 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 TRAM1L1Q8N609 369 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 GLIS1Q8NBF1 620 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 TM9SF4Q92544 642 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 TRIM11Q96F44 468 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 TTC25Q96NG3 672 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 SMAD5Q99717 465 aaKnown RBP11.69□□□□□ -0.54
CTNS-208ENST00000574218 MAP3K3Q99759 626 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 TUBB2BQ9BVA1 445 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 NLNQ9BYT8 704 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 CLSTN2Q9H4D0 955 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 ZFYVE1Q9HBF4 777 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 AGPAT4Q9NRZ5 378 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 TAS2R14Q9NYV8 317 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 MYO1AQ9UBC5 1043 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 SLC23A2Q9UGH3 650 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 B3GNT3Q9Y2A9 372 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 PADI2Q9Y2J8 665 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 ADGRG1Q9Y653 693 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 COPG1Q9Y678 874 aaKnown RBP11.69□□□□□ -0.54
CTNS-208ENST00000574218 SVILO95425 2214 aa11.69□□□□□ -0.54
CTNS-208ENST00000574218 SEC16AO15027 2179 aa11.68□□□□□ -0.54
CTNS-208ENST00000574218 ANKRD66B4E2M5 251 aa11.68□□□□□ -0.54
CTNS-208ENST00000574218 C9J4A7 227 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms