RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ZBTB46Q86UZ6 589 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 ZFAND4Q86XD8 727 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 ZC3H7AQ8IWR0 971 aaKnown RBP15.47■□□□□ 0.07
NUP88-207ENST00000573584 DTWD1Q8N5C7 304 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 TMBIM1Q969X1 311 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 ISG20Q96AZ6 181 aaKnown RBP15.47■□□□□ 0.07
NUP88-207ENST00000573584 COX4I2Q96KJ9 171 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 CDK15Q96Q40 435 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 ASB1Q9Y576 335 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 SPO11Q9Y5K1 396 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 MAGED1Q9Y5V3 778 aaPredicted RBP15.47■□□□□ 0.07
NUP88-207ENST00000573584 ZBTB11O95625 1053 aaPredicted RBP15.47■□□□□ 0.07
NUP88-207ENST00000573584 ARL1P40616 181 aaPredicted RBP15.47■□□□□ 0.07
NUP88-207ENST00000573584 CDKN1CP49918 316 aaPredicted RBP15.47■□□□□ 0.07
NUP88-207ENST00000573584 BMXP51813 675 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 TMBIM6P55061 237 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 MTPNP58546 118 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 YBEYP58557 167 aaPredicted RBP15.47■□□□□ 0.07
NUP88-207ENST00000573584 DAG1Q14118 895 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 CRY1Q16526 586 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 AFTPHQ6ULP2 937 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 CXCL17Q6UXB2 119 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 DLEU7Q6UYE1 221 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 Q6ZSR9 355 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 FAM43BQ6ZT52 329 aaPredicted RBP15.47■□□□□ 0.07
NUP88-207ENST00000573584 STK32CQ86UX6 486 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 PDPRQ8NCN5 879 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 ITFG1Q8TB96 612 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 RMDN1Q96DB5 314 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 UROC1Q96N76 676 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 CD274Q9NZQ7 290 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 EIF2B4Q9UI10 523 aaKnown RBP15.47■□□□□ 0.07
NUP88-207ENST00000573584 SH3GLB1Q9Y371 365 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 ACTL7AQ9Y615 435 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 PTPRDP23468 1912 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 ANKRD12Q6UB98 2062 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 NLRC5Q86WI3 1866 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 UPK1AO00322 258 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 RSL1D1O76021 490 aaKnown RBP15.47■□□□□ 0.07
NUP88-207ENST00000573584 PAX3P23760 479 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 SHMT2P34897 504 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 ZNF140P52738 457 aaPredicted RBP15.47■□□□□ 0.07
NUP88-207ENST00000573584 HK3P52790 923 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 SELPLGQ14242 412 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 BROXQ5VW32 411 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 C9orf131Q5VYM1 1079 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 GPSM1Q86YR5 675 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 DPP10Q8N608 796 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 SIDT2Q8NBJ9 832 aaKnown RBP15.47■□□□□ 0.07
NUP88-207ENST00000573584 OR52B6Q8NGF0 335 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 MYEOVQ96EZ4 313 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 ADAM2Q99965 735 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 ADNPQ9H2P0 1102 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 MARCH2Q9P0N8 246 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 PCDHB8Q9UN66 801 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 TULP3O75386 442 aa15.46■□□□□ 0.07
NUP88-207ENST00000573584 ALPLP05186 524 aa15.46■□□□□ 0.07
NUP88-207ENST00000573584 RAP2AP10114 183 aa15.46■□□□□ 0.07
NUP88-207ENST00000573584 THRBP10828 461 aa15.46■□□□□ 0.07
NUP88-207ENST00000573584 TCF3P15923 654 aa15.46■□□□□ 0.07
NUP88-207ENST00000573584 ZNF12P17014 697 aa15.46■□□□□ 0.07
NUP88-207ENST00000573584 TRIP4Q15650 581 aaPredicted RBP15.46■□□□□ 0.07
NUP88-207ENST00000573584 FAM98BQ52LJ0 330 aaKnown RBP15.46■□□□□ 0.07
NUP88-207ENST00000573584 GLT6D1Q7Z4J2 308 aa15.46■□□□□ 0.07
NUP88-207ENST00000573584 PDZD8Q8NEN9 1154 aa15.46■□□□□ 0.07
NUP88-207ENST00000573584 BPIFB6Q8NFQ5 453 aa15.46■□□□□ 0.07
NUP88-207ENST00000573584 EEF1AKMT1Q8WVE0 214 aa15.46■□□□□ 0.07
NUP88-207ENST00000573584 TRIB3Q96RU7 358 aa15.46■□□□□ 0.07
NUP88-207ENST00000573584 DOCK4Q8N1I0 1966 aa15.46■□□□□ 0.07
NUP88-207ENST00000573584 DOCK3Q8IZD9 2030 aa15.46■□□□□ 0.06
NUP88-207ENST00000573584 SLC12A8A0AV02 714 aa15.46■□□□□ 0.06
NUP88-207ENST00000573584 BOLA2-SMG1P6H3BVE0 249 aa15.46■□□□□ 0.06
NUP88-207ENST00000573584 E2F3O00716 465 aa15.46■□□□□ 0.06
NUP88-207ENST00000573584 VPS26AO75436 327 aa15.46■□□□□ 0.06
NUP88-207ENST00000573584 SEC14L2O76054 403 aa15.46■□□□□ 0.06
NUP88-207ENST00000573584 TSPAN12O95859 305 aa15.46■□□□□ 0.06
NUP88-207ENST00000573584 NFKBIAP25963 317 aa15.46■□□□□ 0.06
NUP88-207ENST00000573584 THPOP40225 353 aa15.46■□□□□ 0.06
NUP88-207ENST00000573584 PSMD7P51665 324 aa15.46■□□□□ 0.06
NUP88-207ENST00000573584 RAB15P59190 212 aa15.46■□□□□ 0.06
NUP88-207ENST00000573584 PLIN5Q00G26 463 aa15.46■□□□□ 0.06
NUP88-207ENST00000573584 CHRNB3Q05901 458 aa15.46■□□□□ 0.06
NUP88-207ENST00000573584 C10orf120Q5SQS8 335 aa15.46■□□□□ 0.06
NUP88-207ENST00000573584 NUDT8Q8WV74 236 aa15.46■□□□□ 0.06
NUP88-207ENST00000573584 NRBF2Q96F24 287 aa15.46■□□□□ 0.06
NUP88-207ENST00000573584 GLT1D1Q96MS3 346 aa15.46■□□□□ 0.06
NUP88-207ENST00000573584 TRMT6Q9UJA5 497 aaKnown RBP15.46■□□□□ 0.06
NUP88-207ENST00000573584 A0A0D9SEW6 157 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 OR1I1O60431 355 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 NIPSNAP2O75323 286 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 BCL10O95999 233 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 ANXA6P08133 673 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 G6PDP11413 515 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 JUNBP17275 347 aaPredicted RBP15.45■□□□□ 0.06
NUP88-207ENST00000573584 ERVPABLB-1P60509 514 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 IL2P60568 153 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 MGAT3Q09327 533 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 THAP5Q7Z6K1 395 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 SERINC5Q86VE9 423 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 FAM126BQ8IXS8 530 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms