RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 CCDC162PA2VCL2 907 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 TMEM8BA6NDV4 472 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 B4DGG1 531 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 CHUKO15111 745 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 KMOO15229 486 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 GPR39O43194 453 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 GRID2O43424 1007 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 MTX2O75431 263 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 ZNF8P17098 575 aaPredicted RBP13.35□□□□□ -0.27
RPAIN-213ENST00000573577 VCLP18206 1134 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 ACRV1P26436 265 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 RPL21P46778 160 aaKnown RBP13.35□□□□□ -0.27
RPAIN-213ENST00000573577 ARSDP51689 593 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 ARL4CP56559 192 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 TARDBPQ13148 414 aaKnown RBP eCLIP13.35□□□□□ -0.27
RPAIN-213ENST00000573577 CAMK2BQ13554 666 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 HIF1AQ16665 826 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 FASTKD1Q53R41 847 aaKnown RBP13.35□□□□□ -0.27
RPAIN-213ENST00000573577 AARS2Q5JTZ9 985 aaKnown RBP13.35□□□□□ -0.27
RPAIN-213ENST00000573577 DNTTIP2Q5QJE6 756 aaKnown RBP13.35□□□□□ -0.27
RPAIN-213ENST00000573577 PERM1Q5SV97 790 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 OGFOD3Q6PK18 319 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 CERS6Q6ZMG9 384 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 LRRTM4Q86VH4 590 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 CACTIN-AS1Q8N1I8 211 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 MMGT1Q8N4V1 131 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 DCBLD1Q8N8Z6 715 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 GPR156Q8NFN8 814 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 OR4L1Q8NH43 312 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 MAPK15Q8TD08 544 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 ZNF778Q96MU6 729 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 NAT9Q9BTE0 207 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 ABCG4Q9H172 646 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 DPEP2Q9H4A9 486 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 TREX1Q9NSU2 369 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 ZDHHC3Q9NYG2 299 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 SLC2A6Q9UGQ3 507 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 CLCA2Q9UQC9 943 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 SNX24Q9Y343 169 aa13.35□□□□□ -0.27
RPAIN-213ENST00000573577 F8W8V4 182 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 PFDN6O15212 129 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 ZNF500O60304 480 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-213ENST00000573577 NOBOXO60393 691 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 KCNJ13O60928 360 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 TTC4O95801 387 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 GOT2P00505 430 aaKnown RBP13.34□□□□□ -0.27
RPAIN-213ENST00000573577 NMBRP28336 390 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 FOXN2P32314 431 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 MRPS25P82663 173 aaKnown RBP13.34□□□□□ -0.27
RPAIN-213ENST00000573577 CTBSQ01459 385 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 CAV1Q03135 178 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 ITIH4Q14624 930 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 GLE1Q53GS7 698 aaKnown RBP13.34□□□□□ -0.27
RPAIN-213ENST00000573577 ZNF648Q5T619 568 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-213ENST00000573577 CDCP2Q5VXM1 449 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 DUPD1Q68J44 220 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 KIAA0930Q6ICG6 404 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-213ENST00000573577 SLC30A9Q6PML9 568 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 CHST15Q7LFX5 561 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-213ENST00000573577 SERPINA9Q86WD7 417 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 TRAPPC5Q8IUR0 188 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 CCNJLQ8IV13 435 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 MPP5Q8N3R9 675 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 KDF1Q8NAX2 398 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-213ENST00000573577 OR6C4Q8NGE1 309 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 LRRC39Q96DD0 335 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 MFSD3Q96ES6 412 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 STAMBPL1Q96FJ0 436 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 DPH5Q9H2P9 285 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 FAM96AQ9H5X1 160 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 CATSPERZQ9NTU4 200 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 SPATS2LQ9NUQ6 558 aaKnown RBP13.34□□□□□ -0.27
RPAIN-213ENST00000573577 TAAR2Q9P1P5 351 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 ST14Q9Y5Y6 855 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 DNMT3AQ9Y6K1 912 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-213ENST00000573577 RPS6KL1Q9Y6S9 549 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 WDFY3Q8IZQ1 3526 aa13.34□□□□□ -0.27
RPAIN-213ENST00000573577 ZNF106Q9H2Y7 1883 aaKnown RBP13.33□□□□□ -0.27
RPAIN-213ENST00000573577 GOLGA4Q13439 2230 aaKnown RBP13.33□□□□□ -0.27
RPAIN-213ENST00000573577 PLXNB3Q9ULL4 1909 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 KLHL33A6NCF5 533 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 OR51F1A6NGY5 319 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 ESPNB1AK53 854 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 QSOX1O00391 747 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 USP1O94782 785 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 MT-CO3P00414 261 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 POLBP06746 335 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 ATP1B2P14415 290 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-213ENST00000573577 PGAM1P18669 254 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 AK4P27144 223 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-213ENST00000573577 ACTR1BP42025 376 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 NSG1P42857 185 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 DRG2P55039 364 aaKnown RBP13.33□□□□□ -0.28
RPAIN-213ENST00000573577 ACTR1AP61163 376 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 HLTFQ14527 1009 aaKnown RBP eCLIP13.33□□□□□ -0.28
RPAIN-213ENST00000573577 ST3GAL2Q16842 350 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 INSCQ1MX18 579 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 BBS9Q3SYG4 887 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 KHDC1Q4VXA5 237 aaKnown RBP13.33□□□□□ -0.28
RPAIN-213ENST00000573577 C14orf28Q4W4Y0 310 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms