RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 NUAK1O60285 661 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 SASH3O75995 380 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 SEC31AO94979 1220 aaKnown RBP8.97□□□□□ -0.97
NDE1-207ENST00000573203 AGTP01019 485 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 ACP5P13686 325 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 ZNF8P17098 575 aaPredicted RBP8.97□□□□□ -0.97
NDE1-207ENST00000573203 PSMB4P28070 264 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 RBMS1P29558 406 aaKnown RBP8.97□□□□□ -0.97
NDE1-207ENST00000573203 ALDH4A1P30038 563 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 HMGCLP35914 325 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 EIF2S3P41091 472 aaKnown RBP8.97□□□□□ -0.97
NDE1-207ENST00000573203 PTGIRP43119 386 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 PDX1P52945 283 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 INHBCP55103 352 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 OR1D5P58170 312 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 GUCY2DQ02846 1103 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 KLF1Q13351 362 aaPredicted RBP8.97□□□□□ -0.97
NDE1-207ENST00000573203 CCNG2Q16589 344 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 AMZ1Q400G9 498 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 ZNF648Q5T619 568 aaPredicted RBP8.97□□□□□ -0.97
NDE1-207ENST00000573203 ZDHHC20Q5W0Z9 365 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 DUPD1Q68J44 220 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 B3GNT8Q7Z7M8 397 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 C17orf82Q86X59 251 aaPredicted RBP8.97□□□□□ -0.97
NDE1-207ENST00000573203 NAGSQ8N159 534 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 TTC30BQ8N4P2 665 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 WDR36Q8NI36 951 aaKnown RBP8.97□□□□□ -0.97
NDE1-207ENST00000573203 SNIP1Q8TAD8 396 aaKnown RBP8.97□□□□□ -0.97
NDE1-207ENST00000573203 GDAP1Q8TB36 358 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 CCDC110Q8TBZ0 833 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 GLYATL1Q969I3 302 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 LRRC45Q96CN5 670 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 ZNF578Q96N58 590 aaPredicted RBP8.97□□□□□ -0.97
NDE1-207ENST00000573203 SPATA13Q96N96 652 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 TMEM74Q96NL1 305 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 PPP1R2P1Q96PQ5 205 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 AP1M1Q9BXS5 423 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 TRIM39Q9HCM9 518 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 MED4Q9NPJ6 270 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 PRDM9Q9NQV7 894 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 THSD1Q9NS62 852 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 ATXN10Q9UBB4 475 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 ATXN7L1Q9ULK2 861 aaPredicted RBP8.97□□□□□ -0.97
NDE1-207ENST00000573203 KCNK6Q9Y257 313 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 AAR2Q9Y312 384 aaKnown RBP8.97□□□□□ -0.97
NDE1-207ENST00000573203 UTP11Q9Y3A2 253 aaKnown RBP8.97□□□□□ -0.97
NDE1-207ENST00000573203 PKP3Q9Y446 797 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 PCYT1BQ9Y5K3 369 aaPredicted RBP8.97□□□□□ -0.97
NDE1-207ENST00000573203 BPTFQ12830 3046 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 ITPR1Q14643 2758 aa8.97□□□□□ -0.97
NDE1-207ENST00000573203 A0A1W2PNU3 283 aaPredicted RBP8.96□□□□□ -0.98
NDE1-207ENST00000573203 GPR89AB7ZAQ6 455 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 STX7O15400 261 aaKnown RBP8.96□□□□□ -0.98
NDE1-207ENST00000573203 B4GAT1O43505 415 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 BUD23O43709 281 aaKnown RBP8.96□□□□□ -0.98
NDE1-207ENST00000573203 VEGFDO43915 354 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 SNX2O60749 519 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 PPFIA2O75334 1257 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 MTX2O75431 263 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 GPR89BP0CG08 455 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 SLC2A4P14672 509 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 COILP38432 576 aaPredicted RBP8.96□□□□□ -0.98
NDE1-207ENST00000573203 SPAM1P38567 509 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 ABCG1P45844 678 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 GPR3P46089 330 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 CARSP49589 748 aaKnown RBP8.96□□□□□ -0.98
NDE1-207ENST00000573203 PPM1FP49593 454 aaPredicted RBP8.96□□□□□ -0.98
NDE1-207ENST00000573203 PCBP4P57723 403 aaKnown RBP8.96□□□□□ -0.98
NDE1-207ENST00000573203 ERVPABLB-1P60509 514 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 B4GALNT1Q00973 533 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 SLC7A5Q01650 507 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 DR1Q01658 176 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 GTF2H3Q13889 308 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 NR1D2Q14995 579 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 INSCQ1MX18 579 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 COL28A1Q2UY09 1125 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 PLA2G4EQ3MJ16 856 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 ATP13A5Q4VNC0 1218 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 CRTC3Q6UUV7 619 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 ARHGEF18Q6ZSZ5 1173 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 RAB11FIP2Q7L804 512 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 ZNF438Q7Z4V0 828 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 ADGRG6Q86SQ4 1221 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 PIM3Q86V86 326 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 LRRTM4Q86VH4 590 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 KLHL7Q8IXQ5 586 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 FBXO39Q8N4B4 442 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 FAM71DQ8N9W8 422 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 GRK7Q8WTQ7 553 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 MAGOHBQ96A72 148 aaKnown RBP8.96□□□□□ -0.98
NDE1-207ENST00000573203 LIN37Q96GY3 246 aaPredicted RBP8.96□□□□□ -0.98
NDE1-207ENST00000573203 TTC25Q96NG3 672 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 VPS35Q96QK1 796 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 APOL2Q9BQE5 337 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 GORASP1Q9BQQ3 440 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 DDX47Q9H0S4 455 aaKnown RBP8.96□□□□□ -0.98
NDE1-207ENST00000573203 TSPYL1Q9H0U9 437 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 OSGEPL1Q9H4B0 414 aa8.96□□□□□ -0.98
NDE1-207ENST00000573203 STN1Q9H668 368 aaKnown RBP8.96□□□□□ -0.98
NDE1-207ENST00000573203 KLC4Q9NSK0 619 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 951.9 ms