RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 NANOGQ9H9S0 305 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 SMPD4Q9NXE4 827 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 ETAA1Q9NY74 926 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 PCDHB9Q9Y5E1 797 aa11.1□□□□□ -0.63
RPAIN-212ENST00000573126 HEMK1Q9Y5R4 338 aaPredicted RBP11.1□□□□□ -0.63
RPAIN-212ENST00000573126 ILVBLA1L0T0 632 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 ZNF840PA6NDX5 716 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 NBNO60934 754 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 EEDO75530 441 aaKnown RBP11.09□□□□□ -0.63
RPAIN-212ENST00000573126 TRMUO75648 421 aaKnown RBP11.09□□□□□ -0.63
RPAIN-212ENST00000573126 F11P03951 625 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 CTPS1P17812 591 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 ITGB6P18564 788 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 FOXM1Q08050 763 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 MERTKQ12866 999 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 ADRM1Q16186 407 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 COQ5Q5HYK3 327 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 INTS11Q5TA45 600 aaKnown RBP11.09□□□□□ -0.63
RPAIN-212ENST00000573126 BORAQ6PGQ7 559 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 TTC33Q6PID6 262 aaPredicted RBP11.09□□□□□ -0.63
RPAIN-212ENST00000573126 TXNDC11Q6PKC3 985 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 RALGPS2Q86X27 583 aaPredicted RBP11.09□□□□□ -0.63
RPAIN-212ENST00000573126 OFCC1Q8IZS5 231 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 FBXO22Q8NEZ5 403 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 OR6K2Q8NGY2 324 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 KCNJ9Q92806 393 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 C1QTNF3Q9BXJ4 246 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 BRINP2Q9C0B6 783 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 RPF2Q9H7B2 306 aaKnown RBP11.09□□□□□ -0.63
RPAIN-212ENST00000573126 RSL24D1Q9UHA3 163 aaKnown RBP11.09□□□□□ -0.63
RPAIN-212ENST00000573126 VPS9D1Q9Y2B5 631 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 A0A1B0GVM2 712 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 ACOX3O15254 700 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 CD160O95971 181 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 CAPN1P07384 714 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 GALTP07902 379 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 CNPP09543 421 aaKnown RBP11.09□□□□□ -0.63
RPAIN-212ENST00000573126 OR1D2P34982 312 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 PABPC1LQ4VXU2 614 aaKnown RBP11.09□□□□□ -0.63
RPAIN-212ENST00000573126 PYCR3Q53H96 274 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 HECTD3Q5T447 861 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 ATXN7L2Q5T6C5 722 aaPredicted RBP11.09□□□□□ -0.63
RPAIN-212ENST00000573126 IRAK1BP1Q5VVH5 260 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 CXorf57Q6NSI4 855 aaKnown RBP11.09□□□□□ -0.63
RPAIN-212ENST00000573126 IL27RAQ6UWB1 636 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 ANKS3Q6ZW76 656 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 FRA10AC1Q70Z53 315 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 LRRC8DQ7L1W4 858 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 LPCAT2Q7L5N7 544 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 MFSD2AQ8NA29 543 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 METTL6Q8TCB7 284 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 EID2BQ96D98 161 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 PPM1MQ96MI6 270 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 RNF38Q9H0F5 515 aa11.09□□□□□ -0.63
RPAIN-212ENST00000573126 LEF1Q9UJU2 399 aaPredicted RBP11.09□□□□□ -0.63
RPAIN-212ENST00000573126 FRMPD3Q5JV73 1810 aa11.08□□□□□ -0.63
RPAIN-212ENST00000573126 TCRBV5S2A0A599 114 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 C2orf78A6NCI8 922 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 PFDN6O15212 129 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 GUCA1CO95843 209 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 ALPIP09923 528 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 G6PDP11413 515 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 MZF1P28698 734 aaPredicted RBP11.08□□□□□ -0.64
RPAIN-212ENST00000573126 RPS6KA3P51812 740 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 OR4D2P58180 307 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 MTPNP58546 118 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 SFRP1Q8N474 314 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 MAGEE2Q8TD90 523 aaPredicted RBP11.08□□□□□ -0.64
RPAIN-212ENST00000573126 C9orf16Q9BUW7 83 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 TTLL2Q9BWV7 592 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 TM6SF2Q9BZW4 377 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 RIC8BQ9NVN3 520 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 LRFN2Q9ULH4 789 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 FCF1Q9Y324 198 aaKnown RBP11.08□□□□□ -0.64
RPAIN-212ENST00000573126 CROCCQ5TZA2 2017 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 GPIP06744 558 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 RFC2P35250 354 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 ALDH3B2P48448 385 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 CLCN7P51798 805 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 DGKQP52824 942 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 PRKG2Q13237 762 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 NR6A1Q15406 480 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 ATP6AP1Q15904 470 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 ADGRF1Q5T601 910 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 FAM151BQ6UXP7 276 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 EFL1Q7Z2Z2 1120 aaKnown RBP11.08□□□□□ -0.64
RPAIN-212ENST00000573126 LYSMD3Q7Z3D4 306 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 ARHGAP22Q7Z5H3 698 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 TTC30BQ8N4P2 665 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 PACRGLQ8N7B6 248 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 TSPEARQ8WU66 669 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 VPS50Q96JG6 964 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 ZNF382Q96SR6 550 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 NSUN3Q9H649 340 aaKnown RBP11.08□□□□□ -0.64
RPAIN-212ENST00000573126 STARD7Q9NQZ5 370 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 ZMYM5Q9UJ78 669 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 ANAPC2Q9UJX6 822 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 SLC8A2Q9UPR5 921 aa11.08□□□□□ -0.64
RPAIN-212ENST00000573126 A0A1W2PQ45 241 aaPredicted RBP11.08□□□□□ -0.64
RPAIN-212ENST00000573126 A0A1W2PQY0 241 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms