RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 FRG1Q14331 258 aaKnown RBP11.73□□□□□ -0.53
NDE1-206ENST00000572967 AARS2Q5JTZ9 985 aaKnown RBP11.73□□□□□ -0.53
NDE1-206ENST00000572967 FNBP1LQ5T0N5 605 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 FAM182AQ5T1J6 154 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 TSTD2Q5T7W7 516 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 RAET1GQ6H3X3 334 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 KIAA0930Q6ICG6 404 aaPredicted RBP11.73□□□□□ -0.53
NDE1-206ENST00000572967 AFTPHQ6ULP2 937 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 ZNF765Q7L2R6 523 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 LYSMD3Q7Z3D4 306 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 HSD11B1LQ7Z5J1 315 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 TMC3Q7Z5M5 1100 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 HEATR4Q86WZ0 1026 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 SFTPA2Q8IWL1 248 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 CBARPQ8N350 705 aaPredicted RBP11.73□□□□□ -0.53
NDE1-206ENST00000572967 SDR16C5Q8N3Y7 309 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.73□□□□□ -0.53
NDE1-206ENST00000572967 CCL4L1Q8NHW4 92 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 SCG3Q8WXD2 468 aaKnown RBP11.73□□□□□ -0.53
NDE1-206ENST00000572967 CDKL2Q92772 493 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 FGF11Q92914 225 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 CAVIN3Q969G5 261 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 ZNF669Q96BR6 464 aaPredicted RBP11.73□□□□□ -0.53
NDE1-206ENST00000572967 SIGLEC10Q96LC7 697 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 COQ10AQ96MF6 247 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 FCRL3Q96P31 734 aaPredicted RBP11.73□□□□□ -0.53
NDE1-206ENST00000572967 PLEKHG4BQ96PX9 1271 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 SMIM14Q96QK8 99 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 CCDC77Q9BR77 488 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 CYP4F12Q9HCS2 524 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 PIH1D1Q9NWS0 290 aaKnown RBP11.73□□□□□ -0.53
NDE1-206ENST00000572967 NSMCE4AQ9NXX6 385 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 ENTPD2Q9Y5L3 495 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 TEX264Q9Y6I9 313 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 RPS6KL1Q9Y6S9 549 aa11.73□□□□□ -0.53
NDE1-206ENST00000572967 UQCRHLA0A096LP55 91 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 AGRPO00253 132 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 AVILO75366 819 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 RPLP0P05388 317 aaKnown RBP11.72□□□□□ -0.53
NDE1-206ENST00000572967 UQCRHP07919 91 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 PIRTP0C851 137 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 MYCLP1P12525 358 aaPredicted RBP11.72□□□□□ -0.53
NDE1-206ENST00000572967 ITGALP20701 1170 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 SPAM1P38567 509 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 ZNF140P52738 457 aaPredicted RBP11.72□□□□□ -0.53
NDE1-206ENST00000572967 PMS2P54278 862 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 NAB1Q13506 487 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 THOC5Q13769 683 aaKnown RBP11.72□□□□□ -0.53
NDE1-206ENST00000572967 ITGA9Q13797 1035 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 COL9A2Q14055 689 aaPredicted RBP11.72□□□□□ -0.53
NDE1-206ENST00000572967 CRYMQ14894 314 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 TRADDQ15628 312 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 LONRF1Q17RB8 773 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 PDPK2PQ6A1A2 396 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 PNCKQ6P2M8 343 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 DOK6Q6PKX4 331 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 TAF8Q7Z7C8 310 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 TMEM135Q86UB9 458 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 SPACA3Q8IXA5 215 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 MPP5Q8N3R9 675 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 TTC30BQ8N4P2 665 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 GSDMBQ8TAX9 411 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 DTX3LQ8TDB6 740 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 AENQ8WTP8 325 aaKnown RBP11.72□□□□□ -0.53
NDE1-206ENST00000572967 DTD2Q96FN9 168 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 CFAP36Q96G28 342 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 PKNOX2Q96KN3 472 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 BBC3Q96PG8 261 aaPredicted RBP11.72□□□□□ -0.53
NDE1-206ENST00000572967 FAM167BQ9BTA0 163 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 TMEM168Q9H0V1 697 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 VPS37BQ9H9H4 285 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 POLR1BQ9H9Y6 1135 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 PPCSQ9HAB8 311 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 ARFGAP3Q9NP61 516 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 NLE1Q9NVX2 485 aaPredicted RBP11.72□□□□□ -0.53
NDE1-206ENST00000572967 CD84Q9UIB8 345 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 VPS9D1Q9Y2B5 631 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 SPO11Q9Y5K1 396 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 SLC30A1Q9Y6M5 507 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 CACNA1GO43497 2377 aa11.72□□□□□ -0.53
NDE1-206ENST00000572967 ARHGEF17Q96PE2 2063 aaPredicted RBP11.71□□□□□ -0.53
NDE1-206ENST00000572967 A0A087WUV0 522 aaPredicted RBP11.71□□□□□ -0.53
NDE1-206ENST00000572967 D6RAR5 112 aa11.71□□□□□ -0.53
NDE1-206ENST00000572967 F8W8V4 182 aa11.71□□□□□ -0.53
NDE1-206ENST00000572967 LDB2O43679 373 aa11.71□□□□□ -0.53
NDE1-206ENST00000572967 TCEA3O75764 348 aa11.71□□□□□ -0.53
NDE1-206ENST00000572967 IVLP07476 585 aa11.71□□□□□ -0.53
NDE1-206ENST00000572967 ABHD2P08910 425 aa11.71□□□□□ -0.53
NDE1-206ENST00000572967 KELP23276 732 aa11.71□□□□□ -0.53
NDE1-206ENST00000572967 CRADDP78560 199 aa11.71□□□□□ -0.53
NDE1-206ENST00000572967 CDK3Q00526 305 aa11.71□□□□□ -0.53
NDE1-206ENST00000572967 ACVR1Q04771 509 aa11.71□□□□□ -0.53
NDE1-206ENST00000572967 KCTD19Q17RG1 926 aaPredicted RBP11.71□□□□□ -0.53
NDE1-206ENST00000572967 KLHL38Q2WGJ6 581 aa11.71□□□□□ -0.53
NDE1-206ENST00000572967 ANKRD20A4Q4UJ75 823 aa11.71□□□□□ -0.53
NDE1-206ENST00000572967 SOWAHCQ53LP3 525 aaPredicted RBP11.71□□□□□ -0.53
NDE1-206ENST00000572967 LYPLAL1Q5VWZ2 237 aa11.71□□□□□ -0.53
NDE1-206ENST00000572967 STEAP4Q687X5 459 aa11.71□□□□□ -0.53
NDE1-206ENST00000572967 MRNIPQ6NTE8 343 aa11.71□□□□□ -0.53
NDE1-206ENST00000572967 B3GNT8Q7Z7M8 397 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms