RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 GPR63Q9BZJ6 419 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 LACRTQ9GZZ8 138 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 CDH19Q9H159 772 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 CLEC4MQ9H2X3 399 aaPredicted RBP7.37□□□□□ -1.23
NUP88-205ENST00000572809 RAD18Q9NS91 495 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 UBP1Q9NZI7 540 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 IMPACTQ9P2X3 320 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 FAM153AQ9UHL3 310 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 GPN3Q9UHW5 284 aaPredicted RBP7.37□□□□□ -1.23
NUP88-205ENST00000572809 CNOT6Q9ULM6 557 aaKnown RBP7.37□□□□□ -1.23
NUP88-205ENST00000572809 SATB2Q9UPW6 733 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 SHOC2Q9UQ13 582 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 PLEKHM1Q9Y4G2 1056 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 ST14Q9Y5Y6 855 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 RNF215Q9Y6U7 377 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 URB1O60287 2271 aaKnown RBP7.37□□□□□ -1.23
NUP88-205ENST00000572809 LRP4O75096 1905 aa7.37□□□□□ -1.23
NUP88-205ENST00000572809 CCDC187A0A096LP49 1063 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 LOC285095A0A1B0GVY8 99 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 A0A1W2PNU3 283 aaPredicted RBP7.36□□□□□ -1.23
NUP88-205ENST00000572809 CCDC66A2RUB6 948 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 RHPN2P1A8MT19 583 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 FADS2P1A8MWK0 482 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 H7C0C1 242 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 APOC4-APOC2K7ER74 178 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 PPM1DO15297 605 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 ZW10O43264 779 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 B4GAT1O43505 415 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 DNAJC6O75061 913 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 FBXO24O75426 580 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 SLC25A14O95258 325 aaPredicted RBP7.36□□□□□ -1.23
NUP88-205ENST00000572809 EPOP01588 193 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 APOC2P02655 101 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 CTNNA2P26232 953 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 ITPKBP27987 946 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 ALDH4A1P30038 563 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 ADH7P40394 386 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 ACTR1BP42025 376 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 TNNT3P45378 269 aaPredicted RBP7.36□□□□□ -1.23
NUP88-205ENST00000572809 ABCG1P45844 678 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 ATP5OP48047 213 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 INHBCP55103 352 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 MAZP56270 477 aaKnown RBP7.36□□□□□ -1.23
NUP88-205ENST00000572809 RWDD2BP57060 319 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 ACTR1AP61163 376 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 B4GALNT1Q00973 533 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 CCDC173Q0VFZ6 552 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 KIF5AQ12840 1032 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 XRCC4Q13426 336 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 IGF2-ASQ6U949 168 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 BBS12Q6ZW61 710 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 CHST15Q7LFX5 561 aaPredicted RBP7.36□□□□□ -1.23
NUP88-205ENST00000572809 KIAA1328Q86T90 577 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 GALNT13Q8IUC8 556 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 NAGSQ8N159 534 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 ZNF567Q8N184 647 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 ARL14Q8N4G2 192 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 GPR26Q8NDV2 337 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 ZNF248Q8NDW4 579 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 ACRBPQ8NEB7 543 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 TTC9Q92623 222 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 PRR11Q96HE9 360 aaPredicted RBP7.36□□□□□ -1.23
NUP88-205ENST00000572809 OR2M4Q96R27 311 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 FERMT1Q9BQL6 677 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 SPATA16Q9BXB7 569 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 STRADBQ9C0K7 418 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 RMI1Q9H9A7 625 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 TRIM39Q9HCM9 518 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 FRRS1LQ9P0K9 344 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 VPS18Q9P253 973 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 KLHL8Q9P2G9 620 aaPredicted RBP7.36□□□□□ -1.23
NUP88-205ENST00000572809 TRHDEQ9UKU6 1024 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 AMFRQ9UKV5 643 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 EFR3BQ9Y2G0 817 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 REXO2Q9Y3B8 237 aaKnown RBP7.36□□□□□ -1.23
NUP88-205ENST00000572809 PCDHGA8Q9Y5G5 932 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 OAS3Q9Y6K5 1087 aaKnown RBP7.36□□□□□ -1.23
NUP88-205ENST00000572809 ADAMTS20P59510 1910 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 RP1P56715 2156 aa7.36□□□□□ -1.23
NUP88-205ENST00000572809 TRBV23OR9-2A0A075B6M9 112 aa7.35□□□□□ -1.23
NUP88-205ENST00000572809 NUAK1O60285 661 aa7.35□□□□□ -1.23
NUP88-205ENST00000572809 EIF4EBP3O60516 100 aaPredicted RBP7.35□□□□□ -1.23
NUP88-205ENST00000572809 TJP3O95049 919 aa7.35□□□□□ -1.23
NUP88-205ENST00000572809 TNFSF15O95150 251 aa7.35□□□□□ -1.23
NUP88-205ENST00000572809 PYGMP11217 842 aa7.35□□□□□ -1.23
NUP88-205ENST00000572809 NID1P14543 1247 aa7.35□□□□□ -1.23
NUP88-205ENST00000572809 BPIP17213 487 aa7.35□□□□□ -1.23
NUP88-205ENST00000572809 RBL1P28749 1068 aa7.35□□□□□ -1.23
NUP88-205ENST00000572809 CDC25BP30305 580 aa7.35□□□□□ -1.23
NUP88-205ENST00000572809 CCKBRP32239 447 aa7.35□□□□□ -1.23
NUP88-205ENST00000572809 GPR3P46089 330 aa7.35□□□□□ -1.23
NUP88-205ENST00000572809 PDX1P52945 283 aa7.35□□□□□ -1.23
NUP88-205ENST00000572809 WNT3AP56704 352 aa7.35□□□□□ -1.23
NUP88-205ENST00000572809 OR1D5P58170 312 aa7.35□□□□□ -1.23
NUP88-205ENST00000572809 RPS26P62854 115 aaKnown RBP7.35□□□□□ -1.23
NUP88-205ENST00000572809 OTUD4Q01804 1114 aaKnown RBP7.35□□□□□ -1.23
NUP88-205ENST00000572809 ZFP36L1Q07352 338 aaKnown RBP7.35□□□□□ -1.23
NUP88-205ENST00000572809 EIF3IQ13347 325 aaKnown RBP7.35□□□□□ -1.23
NUP88-205ENST00000572809 MPP3Q13368 585 aa7.35□□□□□ -1.23
NUP88-205ENST00000572809 NOMO1Q15155 1222 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms