RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 TCTN2Q96GX1 697 aa19.47■□□□□ 0.71
CCDC40-206ENST00000572083 ZNF514Q96K75 400 aaPredicted RBP19.47■□□□□ 0.71
CCDC40-206ENST00000572083 NUP85Q9BW27 656 aa19.47■□□□□ 0.71
CCDC40-206ENST00000572083 RAB33BQ9H082 229 aa19.47■□□□□ 0.71
CCDC40-206ENST00000572083 ZFYVE1Q9HBF4 777 aa19.47■□□□□ 0.71
CCDC40-206ENST00000572083 HAUS2Q9NVX0 235 aa19.47■□□□□ 0.71
CCDC40-206ENST00000572083 AMACRQ9UHK6 382 aa19.47■□□□□ 0.71
CCDC40-206ENST00000572083 ERRFI1Q9UJM3 462 aaPredicted RBP19.47■□□□□ 0.71
CCDC40-206ENST00000572083 SHOC2Q9UQ13 582 aa19.47■□□□□ 0.71
CCDC40-206ENST00000572083 WDR37Q9Y2I8 494 aa19.47■□□□□ 0.71
CCDC40-206ENST00000572083 DPM1O60762 260 aa19.46■□□□□ 0.71
CCDC40-206ENST00000572083 MYBL1P10243 752 aa19.46■□□□□ 0.71
CCDC40-206ENST00000572083 IDSP22304 550 aa19.46■□□□□ 0.71
CCDC40-206ENST00000572083 CCNCP24863 283 aa19.46■□□□□ 0.71
CCDC40-206ENST00000572083 PIGHQ14442 188 aaPredicted RBP19.46■□□□□ 0.71
CCDC40-206ENST00000572083 PAFAH1B3Q15102 231 aaKnown RBP19.46■□□□□ 0.71
CCDC40-206ENST00000572083 IFI16Q16666 785 aaKnown RBP19.46■□□□□ 0.71
CCDC40-206ENST00000572083 FAM182AQ5T1J6 154 aa19.46■□□□□ 0.71
CCDC40-206ENST00000572083 FAM69BQ5VUD6 431 aa19.46■□□□□ 0.71
CCDC40-206ENST00000572083 SLC6A19Q695T7 634 aa19.46■□□□□ 0.71
CCDC40-206ENST00000572083 TTC30BQ8N4P2 665 aa19.46■□□□□ 0.71
CCDC40-206ENST00000572083 TRAM1L1Q8N609 369 aa19.46■□□□□ 0.71
CCDC40-206ENST00000572083 GPR150Q8NGU9 434 aa19.46■□□□□ 0.71
CCDC40-206ENST00000572083 UBXN4Q92575 508 aa19.46■□□□□ 0.71
CCDC40-206ENST00000572083 MR1Q95460 341 aa19.46■□□□□ 0.71
CCDC40-206ENST00000572083 FCRL4Q96PJ5 515 aa19.46■□□□□ 0.71
CCDC40-206ENST00000572083 MAP3K3Q99759 626 aa19.46■□□□□ 0.71
CCDC40-206ENST00000572083 FGF21Q9NSA1 209 aa19.46■□□□□ 0.71
CCDC40-206ENST00000572083 SEMA5BQ9P283 1151 aa19.46■□□□□ 0.71
CCDC40-206ENST00000572083 FARSAQ9Y285 508 aaKnown RBP19.46■□□□□ 0.71
CCDC40-206ENST00000572083 LRRC10BA6NIK2 292 aa19.45■□□□□ 0.7
CCDC40-206ENST00000572083 CPNE3O75131 537 aaKnown RBP19.45■□□□□ 0.7
CCDC40-206ENST00000572083 CDK14O94921 469 aa19.45■□□□□ 0.7
CCDC40-206ENST00000572083 GJC1P36383 396 aa19.45■□□□□ 0.7
CCDC40-206ENST00000572083 SSR1P43307 286 aaKnown RBP19.45■□□□□ 0.7
CCDC40-206ENST00000572083 ARL4DP49703 201 aa19.45■□□□□ 0.7
CCDC40-206ENST00000572083 DCDC1P59894 354 aa19.45■□□□□ 0.7
CCDC40-206ENST00000572083 PDE1BQ01064 536 aa19.45■□□□□ 0.7
CCDC40-206ENST00000572083 ACY1Q03154 408 aa19.45■□□□□ 0.7
CCDC40-206ENST00000572083 GPS2Q13227 327 aa19.45■□□□□ 0.7
CCDC40-206ENST00000572083 DPYSL3Q14195 570 aa19.45■□□□□ 0.7
CCDC40-206ENST00000572083 AGAP9Q5VTM2 703 aa19.45■□□□□ 0.7
CCDC40-206ENST00000572083 TRAPPC5Q8IUR0 188 aa19.45■□□□□ 0.7
CCDC40-206ENST00000572083 TMEM126BQ8IUX1 230 aa19.45■□□□□ 0.7
CCDC40-206ENST00000572083 FDCSPQ8NFU4 85 aa19.45■□□□□ 0.7
CCDC40-206ENST00000572083 NUDT9Q9BW91 350 aa19.45■□□□□ 0.7
CCDC40-206ENST00000572083 ADGRE3Q9BY15 652 aa19.45■□□□□ 0.7
CCDC40-206ENST00000572083 KRT86O43790 486 aa19.44■□□□□ 0.7
CCDC40-206ENST00000572083 SCRG1O75711 98 aa19.44■□□□□ 0.7
CCDC40-206ENST00000572083 CEACAM4O75871 244 aa19.44■□□□□ 0.7
CCDC40-206ENST00000572083 LDLRP01130 860 aa19.44■□□□□ 0.7
CCDC40-206ENST00000572083 LPOP22079 712 aaPredicted RBP19.44■□□□□ 0.7
CCDC40-206ENST00000572083 PDPK2PQ6A1A2 396 aa19.44■□□□□ 0.7
CCDC40-206ENST00000572083 WASH2PQ6VEQ5 465 aa19.44■□□□□ 0.7
CCDC40-206ENST00000572083 C11orf96Q7Z7L8 435 aa19.44■□□□□ 0.7
CCDC40-206ENST00000572083 NIPA2Q8N8Q9 360 aa19.44■□□□□ 0.7
CCDC40-206ENST00000572083 FAM71BQ8TC56 605 aa19.44■□□□□ 0.7
CCDC40-206ENST00000572083 ADAMTS17Q8TE56 1095 aa19.44■□□□□ 0.7
CCDC40-206ENST00000572083 FATE1Q969F0 183 aa19.44■□□□□ 0.7
CCDC40-206ENST00000572083 C19orf60Q96EN9 201 aa19.44■□□□□ 0.7
CCDC40-206ENST00000572083 TSGA13Q96PP4 275 aa19.44■□□□□ 0.7
CCDC40-206ENST00000572083 CHST8Q9H2A9 424 aa19.44■□□□□ 0.7
CCDC40-206ENST00000572083 HSD3B7Q9H2F3 369 aa19.44■□□□□ 0.7
CCDC40-206ENST00000572083 WASH6PQ9NQA3 447 aa19.44■□□□□ 0.7
CCDC40-206ENST00000572083 ANAPC7Q9UJX3 599 aa19.44■□□□□ 0.7
CCDC40-206ENST00000572083 PCDHGB7Q9Y5F8 929 aa19.44■□□□□ 0.7
CCDC40-206ENST00000572083 A6NL46 340 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 KCNK1O00180 336 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 ZNF185O15231 689 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 VEGFDO43915 354 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 JCHAINP01591 159 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 SKILP12757 684 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 FECHP22830 423 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 HALP42357 657 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 GBE1Q04446 702 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 KLHL30Q0D2K2 578 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 RAPSNQ13702 412 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 PLCL1Q15111 1095 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 NR6A1Q15406 480 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 GPR19Q15760 415 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 ATP13A4Q4VNC1 1196 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 DNTTIP2Q5QJE6 756 aaKnown RBP19.43■□□□□ 0.7
CCDC40-206ENST00000572083 RBMXL3Q8N7X1 1067 aaKnown RBP19.43■□□□□ 0.7
CCDC40-206ENST00000572083 ENDOVQ8N8Q3 282 aaKnown RBP19.43■□□□□ 0.7
CCDC40-206ENST00000572083 SLC38A9Q8NBW4 561 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 ISCUQ9H1K1 167 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 NFKBIL1Q9UBC1 381 aaPredicted RBP19.43■□□□□ 0.7
CCDC40-206ENST00000572083 SNX7Q9UNH6 387 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 PSMD13Q9UNM6 376 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 ZNF711Q9Y462 761 aa19.43■□□□□ 0.7
CCDC40-206ENST00000572083 WIPF3A6NGB9 483 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 TLCD2A6NGC4 264 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 TMEM63AO94886 807 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 BPIP17213 487 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 VCLP18206 1134 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 PRKCIP41743 596 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 ARSEP51690 589 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 TUBB4BP68371 445 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 ZBTB17Q13105 803 aa19.42■□□□□ 0.7
CCDC40-206ENST00000572083 TUBB2AQ13885 445 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms