RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 THRBP10828 461 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 PORP16435 677 aaPredicted RBP17.28■□□□□ 0.36
SCARF1-205ENST00000571272 ZNF12P17014 697 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 ALDH3A2P51648 485 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 ITGADQ13349 1161 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 DAG1Q14118 895 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 MAPRE1Q15691 268 aaKnown RBP17.28■□□□□ 0.36
SCARF1-205ENST00000571272 ANKRD34AQ69YU3 496 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 HS3ST5Q8IZT8 346 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 FAM86B1Q8N7N1 296 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 PDPRQ8NCN5 879 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 TADA1Q96BN2 335 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 SMURF2Q9HAU4 748 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 POPDC3Q9HBV1 291 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 WARS2Q9UGM6 360 aaKnown RBP17.28■□□□□ 0.36
SCARF1-205ENST00000571272 DEAF1O75398 565 aaPredicted RBP17.28■□□□□ 0.36
SCARF1-205ENST00000571272 NDUFS3O75489 264 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 ALPLP05186 524 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 CDH1P12830 882 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 HOXB8P17481 243 aaPredicted RBP17.28■□□□□ 0.36
SCARF1-205ENST00000571272 PRKG2Q13237 762 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 PTPRNQ16849 979 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 OR4K2Q8NGD2 314 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 PNPT1Q8TCS8 783 aaKnown RBP17.28■□□□□ 0.36
SCARF1-205ENST00000571272 MYEOVQ96EZ4 313 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 TRPV2Q9Y5S1 764 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 DGKBQ9Y6T7 804 aa17.28■□□□□ 0.36
SCARF1-205ENST00000571272 FAM234BA2RU67 622 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 NOBOXO60393 691 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 SOAT2O75908 522 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 SEC14L2O76054 403 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 CHRNA1P02708 482 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 HLA-DPA1P20036 260 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 OR1E1P30953 314 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 GRK4P32298 578 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 MTHFRP42898 656 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 MAGEA10P43363 369 aaPredicted RBP17.27■□□□□ 0.36
SCARF1-205ENST00000571272 TMBIM6P55061 237 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 TPD52P55327 224 aaPredicted RBP17.27■□□□□ 0.36
SCARF1-205ENST00000571272 ATP6AP1LQ52LC2 224 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 Q6ZSR9 355 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 SIDT2Q8NBJ9 832 aaKnown RBP17.27■□□□□ 0.36
SCARF1-205ENST00000571272 B3GALT6Q96L58 329 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 DGCR6LQ9BY27 220 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 TOR3AQ9H497 397 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 GMIPQ9P107 970 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 SPO11Q9Y5K1 396 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 NIPSNAP2O75323 286 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 OGNP20774 298 aaKnown RBP17.27■□□□□ 0.36
SCARF1-205ENST00000571272 PBX3P40426 434 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 HK3P52790 923 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 SFSWAPQ12872 951 aaKnown RBP17.27■□□□□ 0.36
SCARF1-205ENST00000571272 LAPTM5Q13571 262 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 PDCD4Q53EL6 469 aaKnown RBP17.27■□□□□ 0.36
SCARF1-205ENST00000571272 TAF2Q6P1X5 1199 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 DLEU7Q6UYE1 221 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 GPRIN3Q6ZVF9 776 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 THAP5Q7Z6K1 395 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 FBXO30Q8TB52 745 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 SLC22A17Q8WUG5 538 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 FIG4Q92562 907 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 CARS2Q9HA77 564 aaKnown RBP17.27■□□□□ 0.36
SCARF1-205ENST00000571272 SARS2Q9NP81 518 aaKnown RBP17.27■□□□□ 0.36
SCARF1-205ENST00000571272 CD274Q9NZQ7 290 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 FNIP2Q9P278 1114 aa17.27■□□□□ 0.36
SCARF1-205ENST00000571272 SYCE1LA8MT33 242 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 CFAP99D6REC4 459 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 M0QZQ0 153 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 OR1I1O60431 355 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 MGEA5O60502 916 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 G6PDP11413 515 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 HTR6P50406 440 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 PLA2G16P53816 162 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 PHEXP78562 749 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 IL10RBQ08334 325 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 GRIK2Q13002 908 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 SERINC3Q13530 473 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 MEP1AQ16819 746 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 ZFAND4Q86XD8 727 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 LEMD2Q8NC56 503 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 ISG20Q96AZ6 181 aaKnown RBP17.26■□□□□ 0.35
SCARF1-205ENST00000571272 RMDN1Q96DB5 314 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 EXOC2Q96KP1 924 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 BEGAINQ9BUH8 593 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 NUSAP1Q9BXS6 441 aaKnown RBP17.26■□□□□ 0.35
SCARF1-205ENST00000571272 ZIM2Q9NZV7 527 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 MAGEL2Q9UJ55 1249 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 PSME2Q9UL46 239 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 PCDHGA8Q9Y5G5 932 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 ABCB7O75027 752 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 CRHBPP24387 322 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 CHRNB3Q05901 458 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 TYSND1Q2T9J0 566 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 MON1AQ86VX9 555 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 FAM126BQ8IXS8 530 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 RNF168Q8IYW5 571 aaPredicted RBP17.26■□□□□ 0.35
SCARF1-205ENST00000571272 OR56A4Q8NGH8 313 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 EEF1AKMT1Q8WVE0 214 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 NRBF2Q96F24 287 aa17.26■□□□□ 0.35
SCARF1-205ENST00000571272 UTS2RQ9UKP6 389 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms