RNA–Protein interactions for RNA: ENST00000569487.1

KLHDC4-225, Transcript of kelch domain containing 4, human

TSL 2

Gene KLHDC4, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-225	ENST00000569487		J3KR12	359 aa		18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	UBXN8	O00124	270 aa		18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	SNAP91	O60641	907 aa		18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	RFPL2	O75678	378 aa		18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	SIX3	O95343	332 aa	Predicted RBP	18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	HMBS	P08397	361 aa		18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	CTBS	Q01459	385 aa		18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	CAPRIN1	Q14444	709 aa	Known RBP	18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	GEN1	Q17RS7	908 aa		18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	ABRAXAS1	Q6UWZ7	409 aa		18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	TMEM150A	Q86TG1	271 aa		18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	MIB1	Q86YT6	1006 aa		18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	DDIAS	Q8IXT1	998 aa		18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	TCEAL8	Q8IYN2	117 aa		18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	TUBGCP3	Q96CW5	907 aa		18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	TMEM248	Q9NWD8	314 aa		18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	OAZ3	Q9UMX2	235 aa		18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	CRYL1	Q9Y2S2	319 aa		18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487	GPR45	Q9Y5Y3	372 aa		18.48	■□□□□ 0.55
KLHDC4-225	ENST00000569487		A0A1W2PP18	115 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	SH3PXD2B	A1X283	911 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	TYW5	A2RUC4	315 aa	Known RBP	18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	C5orf67	F2Z3F1	127 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	CCL22	O00626	93 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	PPP6C	O00743	305 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	GLP2R	O95838	553 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	SLC4A1	P02730	911 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	PRR35	P0CG20	571 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	HGF	P14210	728 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	EPCAM	P16422	314 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	GJA1	P17302	382 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	RPL10	P27635	214 aa	Known RBP	18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	OXTR	P30559	389 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	CAPG	P40121	348 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	RPS6KA2	Q15349	733 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	ZNF697	Q5TEC3	545 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	MRNIP	Q6NTE8	343 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	ARRDC2	Q8TBH0	407 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	SLC39A13	Q96H72	371 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	SP110	Q9HB58	689 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	RHBDL2	Q9NX52	303 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	CHCHD3	Q9NX63	227 aa	Known RBP	18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	KCTD3	Q9Y597	815 aa		18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	HEMK1	Q9Y5R4	338 aa	Predicted RBP	18.47	■□□□□ 0.55
KLHDC4-225	ENST00000569487	ATG2A	Q2TAZ0	1938 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	CD3EAP	O15446	510 aa	Known RBP	18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	CLOCK	O15516	846 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	OGN	P20774	298 aa	Known RBP	18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	GSK3B	P49841	420 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	NAA20	P61599	178 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	LCP2	Q13094	533 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	TMED1	Q13445	227 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	GPM6B	Q13491	265 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	PFKFB4	Q16877	469 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	LYSMD3	Q7Z3D4	306 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	PATL1	Q86TB9	770 aa	Known RBP	18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	TBC1D21	Q8IYX1	336 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	KREMEN2	Q8NCW0	462 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	TBATA	Q96M53	351 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	TTLL2	Q9BWV7	592 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	ZYG11B	Q9C0D3	744 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	MUC3B	Q9H195	1237 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	HCFC1R1	Q9NWW0	138 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	UXT	Q9UBK9	157 aa	Predicted RBP	18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	RIMKLB	Q9ULI2	386 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	TLR6	Q9Y2C9	796 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	FADS3	Q9Y5Q0	445 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	PRUNE2	Q8WUY3	3088 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	C2orf78	A6NCI8	922 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	LRRC14B	A6NHZ5	514 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	SCAMP3	O14828	347 aa	Known RBP	18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	KERA	O60938	352 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	CLASP2	O75122	1294 aa	Known RBP	18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	GOT2	P00505	430 aa	Known RBP	18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	DCK	P27707	260 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	STT3A	P46977	705 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	EEFSEC	P57772	596 aa	Known RBP	18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	MSANTD2	Q6P1R3	559 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	ZNF354C	Q86Y25	554 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	RYBP	Q8N488	228 aa	Predicted RBP	18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	DHRSX	Q8N5I4	330 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	PABPC5	Q96DU9	382 aa	Known RBP	18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	NSUN5	Q96P11	429 aa	Known RBP	18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	KCNA7	Q96RP8	456 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	SLC22A12	Q96S37	553 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	AARSD1	Q9BTE6	412 aa	Known RBP	18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	NUSAP1	Q9BXS6	441 aa	Known RBP	18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	ALG2	Q9H553	416 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	CXorf21	Q9HAI6	301 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	INTS10	Q9NVR2	710 aa	Known RBP	18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	SMPD3	Q9NY59	655 aa	Predicted RBP	18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	ZNF639	Q9UID6	485 aa		18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	OAS3	Q9Y6K5	1087 aa	Known RBP	18.46	■□□□□ 0.55
KLHDC4-225	ENST00000569487	TRIM64B	A6NI03	449 aa		18.45	■□□□□ 0.54
KLHDC4-225	ENST00000569487	CCL16	O15467	120 aa		18.45	■□□□□ 0.54
KLHDC4-225	ENST00000569487	TPST1	O60507	370 aa		18.45	■□□□□ 0.54
KLHDC4-225	ENST00000569487	EED	O75530	441 aa	Known RBP	18.45	■□□□□ 0.54

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms