RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 VTI1BQ9UEU0 232 aa12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 INTS6Q9UL03 887 aaKnown RBP12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 RAP2CQ9Y3L5 183 aa12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 STON1Q9Y6Q2 735 aa12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 NPIPB15A6NHN6 443 aaPredicted RBP12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 TMEM114B3SHH9 223 aa12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 BHMG1C9JSJ3 638 aaPredicted RBP12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 CACNG3O60359 315 aa12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 PLCL1Q15111 1095 aa12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 MAPRE2Q15555 327 aa12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 ZNF789Q5FWF6 425 aa12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 CMTM5Q96DZ9 223 aa12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 ZFRQ96KR1 1074 aaKnown RBP12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 WDR83Q9BRX9 315 aaKnown RBP12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 KCNK4Q9NYG8 393 aa12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 DYRK1BQ9Y463 629 aa12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 A0A1W2PP55 124 aa12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 HIST2H2ACQ16777 129 aaPredicted RBP12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 ARL13AQ5H913 290 aaPredicted RBP12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 GPRC6AQ5T6X5 926 aa12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 HIST2H2AA3Q6FI13 130 aa12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 TMPRSS6Q8IU80 811 aa12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 NXPE1Q8N323 547 aa12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 CATSPER2Q96P56 530 aa12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 ASF1AQ9Y294 204 aa12.01□□□□□ -0.49
TMEM170A-205ENST00000568559 MEI4A8MW99 385 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 C9JVG2 144 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 H3BM21 787 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 FFAR3O14843 346 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 GPR42O15529 346 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 KDM1AO60341 852 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 PROCP04070 461 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 BPIP17213 487 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 MPSTP25325 297 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 CDKN1CP49918 316 aaPredicted RBP12□□□□□ -0.49
TMEM170A-205ENST00000568559 NR6A1Q15406 480 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 HNRNPA1L2Q32P51 320 aaKnown RBP12□□□□□ -0.49
TMEM170A-205ENST00000568559 LDLRAP1Q5SW96 308 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 ZNF683Q8IZ20 524 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 ASB2Q96Q27 587 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 MYADMQ96S97 322 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 SERPINI1Q99574 410 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 CD248Q9HCU0 757 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 IL17CQ9P0M4 197 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 PRKAG3Q9UGI9 489 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 ANGPT2O15123 496 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 GCAP28676 217 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 PGM1P36871 562 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 TXNDC5Q8NBS9 432 aaKnown RBP12□□□□□ -0.49
TMEM170A-205ENST00000568559 TMEM237Q96Q45 408 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 CENPKQ9BS16 269 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 OSBPL6Q9BZF3 934 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 PDFQ9HBH1 243 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 TREX1Q9NSU2 369 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 THEGQ9P2T0 379 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 ITM2BQ9Y287 266 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 RNF103-CHMP3A0A140T963 221 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 LRRC72A6NJI9 287 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 UBDO15205 165 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 RECQL5O94762 991 aaPredicted RBP12□□□□□ -0.49
TMEM170A-205ENST00000568559 ABCB1P08183 1280 aaPredicted RBP12□□□□□ -0.49
TMEM170A-205ENST00000568559 GALK1P51570 392 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 SLC18A1P54219 525 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 CEP97Q8IW35 865 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 ZNF614Q8N883 585 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 CDYL2Q8N8U2 506 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 OR13J1Q8NGT2 312 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 OR2A12Q8NGT7 310 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 CDH19Q9H159 772 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 ANK1P16157 1881 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 DCXO43602 365 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 PENKP01210 267 aaPredicted RBP12□□□□□ -0.49
TMEM170A-205ENST00000568559 MLLT1Q03111 559 aaPredicted RBP12□□□□□ -0.49
TMEM170A-205ENST00000568559 TRIM74Q86UV6 250 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 GALNT4Q8N4A0 578 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 EEF1AKMT1Q8WVE0 214 aa12□□□□□ -0.49
TMEM170A-205ENST00000568559 GFM2Q969S9 779 aaKnown RBP12□□□□□ -0.49
TMEM170A-205ENST00000568559 HDAC3O15379 428 aa11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 FSBPO95073 299 aa11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 KRT6AP02538 564 aa11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 KRT6BP04259 564 aa11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 ATP1B2P14415 290 aaPredicted RBP11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 NTSR1P30989 418 aa11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 SOAT1P35610 550 aa11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 KRT6CP48668 564 aa11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 RPIAP49247 311 aa11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 C5orf22Q49AR2 442 aa11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 TXNDC11Q6PKC3 985 aa11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 CEP70Q8NHQ1 597 aa11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 CNDP1Q96KN2 507 aa11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 ZNF395Q9H8N7 513 aaPredicted RBP11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 HEBP1Q9NRV9 189 aa11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 FFAR2O15552 330 aa11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 PAK4O96013 591 aaPredicted RBP11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 RPN2P04844 631 aa11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 ASGR2P07307 311 aa11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 MMP2P08253 660 aa11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 SLC35G4P0C7Q5 338 aa11.99□□□□□ -0.49
TMEM170A-205ENST00000568559 PCNAP12004 261 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms