RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 AMZ2Q86W34 360 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 BPHLQ86WA6 291 aaPredicted RBP18.3■□□□□ 0.52
LINC01238-205ENST00000567549 PMEPA1Q969W9 287 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 EID2BQ96D98 161 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 STAMBPL1Q96FJ0 436 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 TGM7Q96PF1 710 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 CTRCQ99895 268 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 RAB33BQ9H082 229 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 PDE7BQ9NP56 450 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 ARFGAP3Q9NP61 516 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 EPHA6Q9UF33 1036 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 KCND3Q9UK17 655 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 KCTD3Q9Y597 815 aa18.3■□□□□ 0.52
LINC01238-205ENST00000567549 ASH1LQ9NR48 2969 aaKnown RBP18.29■□□□□ 0.52
LINC01238-205ENST00000567549 COMTP21964 271 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 CETN2P41208 172 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 SLC19A1P41440 591 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 STAT5AP42229 794 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 CDKN2BP42772 138 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 HADHBP55084 474 aaKnown RBP18.29■□□□□ 0.52
LINC01238-205ENST00000567549 PDE1BQ01064 536 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 SEPT7Q16181 437 aaKnown RBP18.29■□□□□ 0.52
LINC01238-205ENST00000567549 LONRF2Q1L5Z9 754 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 ITPRIPL1Q6GPH6 555 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 C6orf15Q6UXA7 325 aaPredicted RBP18.29■□□□□ 0.52
LINC01238-205ENST00000567549 MFSD7Q6UXD7 560 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 PID1Q7Z2X4 250 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 RASGRP3Q8IV61 690 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 CCDC50Q8IVM0 306 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 RCOR2Q8IZ40 523 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 SPATA22Q8NHS9 363 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 C9orf43Q8TAL5 461 aaPredicted RBP18.29■□□□□ 0.52
LINC01238-205ENST00000567549 STARD8Q92502 1023 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 UBXN4Q92575 508 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 SPRY4Q9C004 299 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 SLC40A1Q9NP59 571 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 PCYT1BQ9Y5K3 369 aaPredicted RBP18.29■□□□□ 0.52
LINC01238-205ENST00000567549 RPS6KL1Q9Y6S9 549 aa18.29■□□□□ 0.52
LINC01238-205ENST00000567549 GLYATL1P3A0A0U1RQE8 302 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 LOC285095A0A1B0GVY8 99 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 TERTO14746 1132 aaKnown RBP18.28■□□□□ 0.52
LINC01238-205ENST00000567549 ANXA9O76027 345 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 STK10O94804 968 aaKnown RBP18.28■□□□□ 0.52
LINC01238-205ENST00000567549 DLGAP3O95886 979 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 TYRP1P17643 537 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 ARL4DP49703 201 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 WNT3AP56704 352 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 CLCA4Q14CN2 919 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 SPA17Q15506 151 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 ATP13A5Q4VNC0 1218 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 CCDC181Q5TID7 509 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 CACHD1Q5VU97 1274 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 KAZNQ674X7 775 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 SPOCD1Q6ZMY3 1216 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 PPP1R3BQ86XI6 285 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 KATNAL2Q8IYT4 538 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 FCRL4Q96PJ5 515 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 FCRL5Q96RD9 977 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 CHP1Q99653 195 aa18.28■□□□□ 0.52
LINC01238-205ENST00000567549 SIDT1Q9NXL6 827 aaKnown RBP18.28■□□□□ 0.52
LINC01238-205ENST00000567549 ZNF624Q9P2J8 865 aaPredicted RBP18.28■□□□□ 0.52
LINC01238-205ENST00000567549 LOC101059948A0A1B0GTJ6 334 aa18.27■□□□□ 0.52
LINC01238-205ENST00000567549 C2orf81A6NN90 581 aa18.27■□□□□ 0.52
LINC01238-205ENST00000567549 IPO7O95373 1038 aaKnown RBP18.27■□□□□ 0.52
LINC01238-205ENST00000567549 NFKB1P19838 968 aa18.27■□□□□ 0.52
LINC01238-205ENST00000567549 RPL10P27635 214 aaKnown RBP18.27■□□□□ 0.52
LINC01238-205ENST00000567549 GEMP55040 296 aa18.27■□□□□ 0.52
LINC01238-205ENST00000567549 DMPKQ09013 629 aa18.27■□□□□ 0.52
LINC01238-205ENST00000567549 XRCC4Q13426 336 aa18.27■□□□□ 0.52
LINC01238-205ENST00000567549 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.27■□□□□ 0.52
LINC01238-205ENST00000567549 ZNF648Q5T619 568 aaPredicted RBP18.27■□□□□ 0.52
LINC01238-205ENST00000567549 KMT5CQ86Y97 462 aa18.27■□□□□ 0.52
LINC01238-205ENST00000567549 DDHD1Q8NEL9 900 aa18.27■□□□□ 0.52
LINC01238-205ENST00000567549 BLOC1S5Q8TDH9 187 aa18.27■□□□□ 0.52
LINC01238-205ENST00000567549 ZFPM2Q8WW38 1151 aa18.27■□□□□ 0.52
LINC01238-205ENST00000567549 HAUS1Q96CS2 278 aa18.27■□□□□ 0.52
LINC01238-205ENST00000567549 OR6C1Q96RD1 312 aa18.27■□□□□ 0.52
LINC01238-205ENST00000567549 CD180Q99467 661 aa18.27■□□□□ 0.52
LINC01238-205ENST00000567549 BPIFA1Q9NP55 256 aa18.27■□□□□ 0.52
LINC01238-205ENST00000567549 SMOXQ9NWM0 555 aa18.27■□□□□ 0.52
LINC01238-205ENST00000567549 UBP1Q9NZI7 540 aa18.27■□□□□ 0.52
LINC01238-205ENST00000567549 RSPH14Q9UHP6 348 aa18.27■□□□□ 0.52
LINC01238-205ENST00000567549 STX7O15400 261 aaKnown RBP18.26■□□□□ 0.51
LINC01238-205ENST00000567549 MTX2O75431 263 aa18.26■□□□□ 0.51
LINC01238-205ENST00000567549 NDUFA10O95299 355 aa18.26■□□□□ 0.51
LINC01238-205ENST00000567549 RECKO95980 971 aa18.26■□□□□ 0.51
LINC01238-205ENST00000567549 PRKAR1AP10644 381 aa18.26■□□□□ 0.51
LINC01238-205ENST00000567549 RALBP11234 206 aa18.26■□□□□ 0.51
LINC01238-205ENST00000567549 MSH3P20585 1137 aa18.26■□□□□ 0.51
LINC01238-205ENST00000567549 AKT1P31749 480 aa18.26■□□□□ 0.51
LINC01238-205ENST00000567549 MAGEA1P43355 309 aa18.26■□□□□ 0.51
LINC01238-205ENST00000567549 GFERP55789 205 aa18.26■□□□□ 0.51
LINC01238-205ENST00000567549 COPS2P61201 443 aa18.26■□□□□ 0.51
LINC01238-205ENST00000567549 ACY1Q03154 408 aa18.26■□□□□ 0.51
LINC01238-205ENST00000567549 GPR18Q14330 331 aa18.26■□□□□ 0.51
LINC01238-205ENST00000567549 PRPSAP1Q14558 356 aa18.26■□□□□ 0.51
LINC01238-205ENST00000567549 PLCL1Q15111 1095 aa18.26■□□□□ 0.51
LINC01238-205ENST00000567549 SLC1A5Q15758 541 aa18.26■□□□□ 0.51
LINC01238-205ENST00000567549 TAZQ16635 292 aa18.26■□□□□ 0.51
LINC01238-205ENST00000567549 IRGCQ6NXR0 463 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms