RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 TEX101Q9BY14 249 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 KRTAP3-3Q9BYR6 98 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 KRTAP3-2Q9BYR7 98 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 ZYG11BQ9C0D3 744 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 EPS8L2Q9H6S3 715 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 TAS2R14Q9NYV8 317 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 TNFRSF10DQ9UBN6 386 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 SLC17A4Q9Y2C5 497 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 REXO2Q9Y3B8 237 aaKnown RBP9.54□□□□□ -0.88
CAPN3-216ENST00000567071 ST14Q9Y5Y6 855 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 HIVEP2P31629 2446 aa9.54□□□□□ -0.88
CAPN3-216ENST00000567071 IGLV3-10A0A075B6K4 115 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 A0A0U1RQJ8 604 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 TSPAN11A1L157 253 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 OR5K4A6NMS3 321 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 RNF212BA8MTL3 300 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 EIF3CLB5ME19 914 aaKnown RBP9.53□□□□□ -0.88
CAPN3-216ENST00000567071 MED7O43513 233 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 BUB1O43683 1085 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 SCRG1O75711 98 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 PIGNO95427 931 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 INHBBP09529 407 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 CA5AP35218 305 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 ACVRL1P37023 503 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 YBX1P67809 324 aaKnown RBP9.53□□□□□ -0.88
CAPN3-216ENST00000567071 NOMO3P69849 1222 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 PPP2R2BQ00005 443 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 CDK3Q00526 305 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 PCOLCEQ15113 449 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 PRKD1Q15139 912 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-216ENST00000567071 SPA17Q15506 151 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 SLC18A3Q16572 532 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 CLEC16AQ2KHT3 1053 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 CCDC122Q5T0U0 273 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 CES4AQ5XG92 561 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 IYDQ6PHW0 289 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 LEKR1Q6ZMV7 388 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 KIAA1328Q86T90 577 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 ZNF677Q86XU0 584 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 LZTR1Q8N653 840 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 C1orf131Q8NDD1 294 aaKnown RBP9.53□□□□□ -0.88
CAPN3-216ENST00000567071 SLC30A5Q8TAD4 765 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 STK32AQ8WU08 396 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 KLHL6Q8WZ60 621 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 NR4A3Q92570 626 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 C1orf74Q96LT6 269 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 ZNF641Q96N77 438 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-216ENST00000567071 SLC2A13Q96QE2 648 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 EIF3CQ99613 913 aaKnown RBP9.53□□□□□ -0.88
CAPN3-216ENST00000567071 SMR3AQ99954 134 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 MLPHQ9BV36 600 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-216ENST00000567071 TMEM51Q9NW97 253 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 CPNE7Q9UBL6 633 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 TFR2Q9UP52 801 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 BTRCQ9Y297 605 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 ZKSCAN5Q9Y2L8 839 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 SLC30A1Q9Y6M5 507 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 TLN2Q9Y4G6 2542 aa9.53□□□□□ -0.88
CAPN3-216ENST00000567071 C9J4A7 227 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 UNC5CO95185 931 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 CCDC175P0C221 793 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 DNASE1P24855 282 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 PCSK6P29122 969 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 GPD2P43304 727 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 MAGEA1P43355 309 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 POLD2P49005 469 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 POLR2LP62875 67 aaKnown RBP9.52□□□□□ -0.89
CAPN3-216ENST00000567071 ADORA2A-AS1P86434 159 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 GPS2Q13227 327 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 TAF5Q15542 800 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 SMYD5Q6GMV2 418 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 RAET1GQ6H3X3 334 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 IRGCQ6NXR0 463 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 ALKBH5Q6P6C2 394 aaKnown RBP9.52□□□□□ -0.89
CAPN3-216ENST00000567071 TRIM72Q6ZMU5 477 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 MRGPREQ86SM8 312 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 TRIM48Q8IWZ4 208 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 ZNF683Q8IZ20 524 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 INTS1Q8N201 2190 aaKnown RBP9.52□□□□□ -0.89
CAPN3-216ENST00000567071 OR8K5Q8NH50 307 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 CPA5Q8WXQ8 436 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 CPT1BQ92523 772 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 VOPP1Q96AW1 172 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 ZNF514Q96K75 400 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-216ENST00000567071 ALPK1Q96QP1 1244 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 PACSIN1Q9BY11 444 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 MAGEH1Q9H213 219 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 ZBTB20Q9HC78 741 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-216ENST00000567071 ATP13A2Q9NQ11 1180 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 ASNSD1Q9NWL6 643 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 TRMT1Q9NXH9 659 aaKnown RBP9.52□□□□□ -0.89
CAPN3-216ENST00000567071 NENFQ9UMX5 172 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 PCDHGC3Q9UN70 934 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 PPP2R2CQ9Y2T4 447 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 PCDHA13Q9Y5I0 950 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 CSAG2Q9Y5P2 127 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 SNX10Q9Y5X0 201 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 ADGRG1Q9Y653 693 aa9.52□□□□□ -0.89
CAPN3-216ENST00000567071 SEC16AO15027 2179 aa9.51□□□□□ -0.89
CAPN3-216ENST00000567071 USP27XA6NNY8 438 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms