RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 TIGD2Q4W5G0 525 aa15.52■□□□□ 0.08
COMMD4-215ENST00000566843 CYP2U1Q7Z449 544 aa15.52■□□□□ 0.08
COMMD4-215ENST00000566843 RBM23Q86U06 439 aaKnown RBP15.52■□□□□ 0.08
COMMD4-215ENST00000566843 SVOPLQ8N434 492 aa15.52■□□□□ 0.08
COMMD4-215ENST00000566843 AADATQ8N5Z0 425 aa15.52■□□□□ 0.08
COMMD4-215ENST00000566843 OR6Q1Q8NGQ2 317 aa15.52■□□□□ 0.08
COMMD4-215ENST00000566843 FBLIM1Q8WUP2 373 aa15.52■□□□□ 0.08
COMMD4-215ENST00000566843 ZNF566Q969W8 418 aa15.52■□□□□ 0.08
COMMD4-215ENST00000566843 KIAA1191Q96A73 305 aa15.52■□□□□ 0.08
COMMD4-215ENST00000566843 OSMRQ99650 979 aa15.52■□□□□ 0.08
COMMD4-215ENST00000566843 HERC2P3Q9BVR0 1158 aa15.52■□□□□ 0.08
COMMD4-215ENST00000566843 C1QTNF3Q9BXJ4 246 aa15.52■□□□□ 0.08
COMMD4-215ENST00000566843 RMND5AQ9H871 391 aa15.52■□□□□ 0.08
COMMD4-215ENST00000566843 SMURF2Q9HAU4 748 aa15.52■□□□□ 0.08
COMMD4-215ENST00000566843 NECTIN3Q9NQS3 549 aa15.52■□□□□ 0.08
COMMD4-215ENST00000566843 SUN2Q9UH99 717 aa15.52■□□□□ 0.08
COMMD4-215ENST00000566843 CRYL1Q9Y2S2 319 aa15.52■□□□□ 0.08
COMMD4-215ENST00000566843 FAM92AA1XBS5 289 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 OR51F1A6NGY5 319 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 ARNTLO00327 626 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 SLC1A7O00341 560 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 SNX2O60749 519 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 CNTN5O94779 1100 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 NTRK1P04629 796 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 BMP4P12644 408 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 AGXTP21549 392 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 PIGAP37287 484 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 BRMS1LQ5PSV4 323 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 ANKS6Q68DC2 871 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 ARMCX6Q7L4S7 300 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 RALGPS2Q86X27 583 aaPredicted RBP15.52■□□□□ 0.07
COMMD4-215ENST00000566843 PHF10Q8WUB8 498 aaKnown RBP15.52■□□□□ 0.07
COMMD4-215ENST00000566843 FAR1Q8WVX9 515 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 TRIB2Q92519 343 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 SDCCAG3Q96C92 435 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 PABPC5Q96DU9 382 aaKnown RBP15.52■□□□□ 0.07
COMMD4-215ENST00000566843 CCDC115Q96NT0 180 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 PIF1Q9H611 641 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 CSNK1G1Q9HCP0 422 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 PAK1IP1Q9NWT1 392 aaPredicted RBP15.52■□□□□ 0.07
COMMD4-215ENST00000566843 SMPD4Q9NXE4 827 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 ERVK-11Q9UQG0 969 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 TIMM22Q9Y584 194 aa15.52■□□□□ 0.07
COMMD4-215ENST00000566843 CCL22O00626 93 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 PAGE1O75459 146 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 CRCPO75575 148 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 CCDC159P0C7I6 412 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 UROSP10746 265 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 SLC2A3P11169 496 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 S100A1P23297 94 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 IGFBP6P24592 240 aaPredicted RBP15.51■□□□□ 0.07
COMMD4-215ENST00000566843 CASP2P42575 452 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 GSSP48637 474 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 LHX1P48742 406 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 TPD52P55327 224 aaPredicted RBP15.51■□□□□ 0.07
COMMD4-215ENST00000566843 SELENBP1Q13228 472 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 KCNAB2Q13303 367 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 SELPLGQ14242 412 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 INAQ16352 499 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 FBXO39Q8N4B4 442 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 PROKR1Q8TCW9 393 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 FATE1Q969F0 183 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 RBM4BQ9BQ04 359 aaKnown RBP15.51■□□□□ 0.07
COMMD4-215ENST00000566843 RBM4Q9BWF3 364 aaKnown RBP15.51■□□□□ 0.07
COMMD4-215ENST00000566843 UGT2B28Q9BY64 529 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 FAM49AQ9H0Q0 323 aaPredicted RBP15.51■□□□□ 0.07
COMMD4-215ENST00000566843 GORASP2Q9H8Y8 452 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 CARS2Q9HA77 564 aaKnown RBP15.51■□□□□ 0.07
COMMD4-215ENST00000566843 LTB4R2Q9NPC1 389 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 IRAK2O43187 625 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 LDB2O43679 373 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 CHRNA1P02708 482 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 MMP2P08253 660 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 PCNAP12004 261 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 RYKP34925 604 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 CDC20Q12834 499 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 DGUOKQ16854 277 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 ADPRMQ3LIE5 342 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 ZNF691Q5VV52 312 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 SYVN1Q86TM6 617 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 RTL3Q8N8U3 475 aaKnown RBP15.51■□□□□ 0.07
COMMD4-215ENST00000566843 ARRDC4Q8NCT1 418 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 OR7A2PQ8NGA2 310 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 OR2T11Q8NH01 316 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 YIPF6Q96EC8 236 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 SMARCD1Q96GM5 515 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 SENP8Q96LD8 212 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 AARSD1Q9BTE6 412 aaKnown RBP15.51■□□□□ 0.07
COMMD4-215ENST00000566843 BTBD2Q9BX70 525 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 KLHL25Q9H0H3 589 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 MROH8Q9H579 483 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 SEMA4BQ9NPR2 832 aaPredicted RBP15.51■□□□□ 0.07
COMMD4-215ENST00000566843 THG1LQ9NWX6 298 aaKnown RBP15.51■□□□□ 0.07
COMMD4-215ENST00000566843 PMF1-BGLAPU3KQ54 211 aa15.51■□□□□ 0.07
COMMD4-215ENST00000566843 RRN3P2A6NIE6 340 aa15.5■□□□□ 0.07
COMMD4-215ENST00000566843 M0QX08 132 aa15.5■□□□□ 0.07
COMMD4-215ENST00000566843 NDST3O95803 873 aa15.5■□□□□ 0.07
COMMD4-215ENST00000566843 HOXD8P13378 290 aaPredicted RBP15.5■□□□□ 0.07
COMMD4-215ENST00000566843 PTPN2P17706 415 aa15.5■□□□□ 0.07
COMMD4-215ENST00000566843 GRIK1P39086 918 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms