RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 AGAP9Q5VTM2 703 aa30.18■■■□□ 2.42
CTCF-203ENST00000566078 LRRC8EQ6NSJ5 796 aa30.18■■■□□ 2.42
CTCF-203ENST00000566078 TRIM69Q86WT6 500 aa30.18■■■□□ 2.42
CTCF-203ENST00000566078 HEATR4Q86WZ0 1026 aa30.18■■■□□ 2.42
CTCF-203ENST00000566078 SGF29Q96ES7 293 aa30.18■■■□□ 2.42
CTCF-203ENST00000566078 HIC2Q96JB3 615 aa30.18■■■□□ 2.42
CTCF-203ENST00000566078 PANX3Q96QZ0 392 aa30.18■■■□□ 2.42
CTCF-203ENST00000566078 ZCCHC2Q9C0B9 1178 aaKnown RBP30.18■■■□□ 2.42
CTCF-203ENST00000566078 DHRS7Q9Y394 339 aa30.18■■■□□ 2.42
CTCF-203ENST00000566078 ANKRD12Q6UB98 2062 aa30.17■■■□□ 2.42
CTCF-203ENST00000566078 AP2A2O94973 939 aa30.17■■■□□ 2.42
CTCF-203ENST00000566078 SEMA4FO95754 770 aa30.17■■■□□ 2.42
CTCF-203ENST00000566078 TMEM115Q12893 351 aaPredicted RBP30.17■■■□□ 2.42
CTCF-203ENST00000566078 MTAPQ13126 283 aa30.17■■■□□ 2.42
CTCF-203ENST00000566078 RASGEF1AQ8N9B8 481 aa30.17■■■□□ 2.42
CTCF-203ENST00000566078 TPSD1Q9BZJ3 242 aa30.17■■■□□ 2.42
CTCF-203ENST00000566078 CEP192Q8TEP8 1941 aa30.16■■■□□ 2.42
CTCF-203ENST00000566078 APBB3O95704 486 aa30.16■■■□□ 2.42
CTCF-203ENST00000566078 SERPINB4P48594 390 aa30.16■■■□□ 2.42
CTCF-203ENST00000566078 KLC3Q6P597 504 aa30.16■■■□□ 2.42
CTCF-203ENST00000566078 CPNE9Q8IYJ1 553 aa30.16■■■□□ 2.42
CTCF-203ENST00000566078 FZD3Q9NPG1 666 aa30.16■■■□□ 2.42
CTCF-203ENST00000566078 WDR91A4D1P6 747 aa30.15■■■□□ 2.42
CTCF-203ENST00000566078 OR2AG2A6NM03 316 aa30.15■■■□□ 2.42
CTCF-203ENST00000566078 RAD51BO15315 384 aa30.15■■■□□ 2.42
CTCF-203ENST00000566078 SGTAO43765 313 aa30.15■■■□□ 2.42
CTCF-203ENST00000566078 FSTL5Q8N475 847 aaPredicted RBP30.15■■■□□ 2.42
CTCF-203ENST00000566078 NKAPQ8N5F7 415 aaKnown RBP30.15■■■□□ 2.42
CTCF-203ENST00000566078 CKAP2Q8WWK9 683 aa30.15■■■□□ 2.42
CTCF-203ENST00000566078 ASB12Q8WXK4 309 aa30.15■■■□□ 2.42
CTCF-203ENST00000566078 INPP5DQ92835 1189 aa30.15■■■□□ 2.42
CTCF-203ENST00000566078 COX14Q96I36 57 aa30.15■■■□□ 2.42
CTCF-203ENST00000566078 SPATS2LQ9NUQ6 558 aaKnown RBP30.15■■■□□ 2.42
CTCF-203ENST00000566078 A6NNZ2 444 aa30.14■■■□□ 2.42
CTCF-203ENST00000566078 TK2O00142 265 aa30.14■■■□□ 2.42
CTCF-203ENST00000566078 SLC31A1O15431 190 aa30.14■■■□□ 2.42
CTCF-203ENST00000566078 APOA4P06727 396 aa30.14■■■□□ 2.42
CTCF-203ENST00000566078 CD1DP15813 335 aa30.14■■■□□ 2.42
CTCF-203ENST00000566078 TEAD1P28347 426 aa30.14■■■□□ 2.42
CTCF-203ENST00000566078 IGFALSP35858 605 aa30.14■■■□□ 2.42
CTCF-203ENST00000566078 CDK3Q00526 305 aa30.14■■■□□ 2.42
CTCF-203ENST00000566078 INPP5AQ14642 412 aa30.14■■■□□ 2.42
CTCF-203ENST00000566078 TUBB8Q3ZCM7 444 aa30.14■■■□□ 2.42
CTCF-203ENST00000566078 ADGRG6Q86SQ4 1221 aa30.14■■■□□ 2.42
CTCF-203ENST00000566078 ZBTB2Q8N680 514 aa30.14■■■□□ 2.42
CTCF-203ENST00000566078 LINGO1Q96FE5 620 aa30.14■■■□□ 2.42
CTCF-203ENST00000566078 TSSK1BQ9BXA7 367 aa30.14■■■□□ 2.42
CTCF-203ENST00000566078 OR2AG1Q9H205 316 aa30.14■■■□□ 2.42
CTCF-203ENST00000566078 TRIM39Q9HCM9 518 aa30.14■■■□□ 2.42
CTCF-203ENST00000566078 XPR1Q9UBH6 696 aa30.14■■■□□ 2.42
CTCF-203ENST00000566078 F8W8V4 182 aa30.14■■■□□ 2.41
CTCF-203ENST00000566078 QSOX1O00391 747 aa30.14■■■□□ 2.41
CTCF-203ENST00000566078 MAGEC1O60732 1142 aa30.14■■■□□ 2.41
CTCF-203ENST00000566078 SHOX2O60902 331 aaPredicted RBP30.14■■■□□ 2.41
CTCF-203ENST00000566078 OXTRP30559 389 aa30.14■■■□□ 2.41
CTCF-203ENST00000566078 LSP1P33241 339 aa30.14■■■□□ 2.41
CTCF-203ENST00000566078 CTSCP53634 463 aa30.14■■■□□ 2.41
CTCF-203ENST00000566078 IL2P60568 153 aa30.14■■■□□ 2.41
CTCF-203ENST00000566078 SIGLEC14Q08ET2 396 aa30.14■■■□□ 2.41
CTCF-203ENST00000566078 OTOAQ7RTW8 1153 aa30.14■■■□□ 2.41
CTCF-203ENST00000566078 TOE1Q96GM8 510 aaKnown RBP30.14■■■□□ 2.41
CTCF-203ENST00000566078 MYOCQ99972 504 aa30.14■■■□□ 2.41
CTCF-203ENST00000566078 MECRQ9BV79 373 aa30.14■■■□□ 2.41
CTCF-203ENST00000566078 WDR26Q9H7D7 661 aa30.14■■■□□ 2.41
CTCF-203ENST00000566078 CPSF2Q9P2I0 782 aaKnown RBP30.14■■■□□ 2.41
CTCF-203ENST00000566078 ZNF217O75362 1048 aa30.13■■■□□ 2.41
CTCF-203ENST00000566078 GTF2H3Q13889 308 aa30.13■■■□□ 2.41
CTCF-203ENST00000566078 ACAP2Q15057 778 aa30.13■■■□□ 2.41
CTCF-203ENST00000566078 TECRLQ5HYJ1 363 aa30.13■■■□□ 2.41
CTCF-203ENST00000566078 BEND7Q8N7W2 519 aaPredicted RBP30.13■■■□□ 2.41
CTCF-203ENST00000566078 MAGEB18Q96M61 343 aa30.13■■■□□ 2.41
CTCF-203ENST00000566078 TEX101Q9BY14 249 aa30.13■■■□□ 2.41
CTCF-203ENST00000566078 DERL2Q9GZP9 239 aa30.13■■■□□ 2.41
CTCF-203ENST00000566078 ATXN10Q9UBB4 475 aa30.13■■■□□ 2.41
CTCF-203ENST00000566078 OR1A2Q9Y585 309 aa30.13■■■□□ 2.41
CTCF-203ENST00000566078 CDK14O94921 469 aa30.12■■■□□ 2.41
CTCF-203ENST00000566078 TSPAN12O95859 305 aa30.12■■■□□ 2.41
CTCF-203ENST00000566078 FTH1P02794 183 aa30.12■■■□□ 2.41
CTCF-203ENST00000566078 TFEBP19484 476 aa30.12■■■□□ 2.41
CTCF-203ENST00000566078 PXNP49023 591 aaPredicted RBP30.12■■■□□ 2.41
CTCF-203ENST00000566078 CWF19L1Q69YN2 538 aaKnown RBP30.12■■■□□ 2.41
CTCF-203ENST00000566078 TMEM220Q6QAJ8 160 aa30.12■■■□□ 2.41
CTCF-203ENST00000566078 NAPRTQ6XQN6 538 aa30.12■■■□□ 2.41
CTCF-203ENST00000566078 EEF1AKMT1Q8WVE0 214 aa30.12■■■□□ 2.41
CTCF-203ENST00000566078 MRPL57Q9BQC6 102 aaKnown RBP30.12■■■□□ 2.41
CTCF-203ENST00000566078 MRPL46Q9H2W6 279 aaKnown RBP30.12■■■□□ 2.41
CTCF-203ENST00000566078 CCDC134Q9H6E4 229 aa30.12■■■□□ 2.41
CTCF-203ENST00000566078 LATS2Q9NRM7 1088 aa30.12■■■□□ 2.41
CTCF-203ENST00000566078 ZBTB14O43829 449 aa30.11■■■□□ 2.41
CTCF-203ENST00000566078 PDGFBP01127 241 aaPredicted RBP30.11■■■□□ 2.41
CTCF-203ENST00000566078 BPGMP07738 259 aa30.11■■■□□ 2.41
CTCF-203ENST00000566078 CD6P30203 668 aa30.11■■■□□ 2.41
CTCF-203ENST00000566078 CCR7P32248 378 aa30.11■■■□□ 2.41
CTCF-203ENST00000566078 PRLHRP49683 370 aa30.11■■■□□ 2.41
CTCF-203ENST00000566078 PCLAFQ15004 111 aa30.11■■■□□ 2.41
CTCF-203ENST00000566078 PDK4Q16654 411 aa30.11■■■□□ 2.41
CTCF-203ENST00000566078 TTLL9Q3SXZ7 439 aa30.11■■■□□ 2.41
CTCF-203ENST00000566078 DOK6Q6PKX4 331 aa30.11■■■□□ 2.41
CTCF-203ENST00000566078 RLN3Q8WXF3 142 aa30.11■■■□□ 2.41
CTCF-203ENST00000566078 LGR4Q9BXB1 951 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms