RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 SLFN11Q7Z7L1 901 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 GAS2L3Q86XJ1 694 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 ZNF677Q86XU0 584 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 DSELQ8IZU8 1212 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 SLC38A9Q8NBW4 561 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 PPP4R1Q8TF05 950 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 SCAMP4Q969E2 229 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 CCDC120Q96HB5 630 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 COX14Q96I36 57 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 SLX1AQ9BQ83 275 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 TRIM5Q9C035 493 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 RBSNQ9H1K0 784 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 GANQ9H2C0 597 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 PDFQ9HBH1 243 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 ZBTB20Q9HC78 741 aaPredicted RBP8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 FAM207AQ9NSI2 230 aaPredicted RBP8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 OLAHQ9NV23 265 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 CD84Q9UIB8 345 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 NOVA2Q9UNW9 492 aaKnown RBP8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 NEU3Q9UQ49 428 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 PADI2Q9Y2J8 665 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 PCDHGC4Q9Y5F7 938 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 MYO7BQ6PIF6 2116 aa8.87□□□□□ -0.99
VPS9D1-205ENST00000565452 A0A0U1RQS6 177 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 UBA6A0AVT1 1052 aaPredicted RBP8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 TMEM200CA6NKL6 621 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 FANCGO15287 622 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 HTRA2O43464 458 aaPredicted RBP8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 CREB3O43889 395 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 SOCS5O75159 536 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 SOD1P00441 154 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 CPP00450 1065 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 ATP1A1P05023 1023 aaKnown RBP8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 CD63P08962 238 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 TPM1P09493 284 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 AGXTP21549 392 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 SOX5P35711 763 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 PAPOLAP51003 745 aaKnown RBP8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 JAM2P57087 298 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 ZNF169Q14929 603 aaPredicted RBP8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 PLCL1Q15111 1095 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 TLR1Q15399 786 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 HIF1AQ16665 826 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 C15orf59Q2T9L4 293 aaPredicted RBP8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 CCDC14Q49A88 953 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 FAM69BQ5VUD6 431 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 LCN10Q6JVE6 187 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 TRNP1Q6NT89 227 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 RPUSD3Q6P087 351 aaKnown RBP8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 USP45Q70EL2 814 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 STRADAQ7RTN6 431 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 TGIF2LYQ8IUE0 185 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 D2HGDHQ8N465 521 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 RXFP2Q8WXD0 754 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 RSC1A1Q92681 617 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 SYN2Q92777 582 aaPredicted RBP8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 NTAN1Q96AB6 310 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 MTFMTQ96DP5 389 aaKnown RBP8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 GBP5Q96PP8 586 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 DPH2Q9BQC3 489 aaPredicted RBP8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 DHRS4Q9BTZ2 278 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 XPO4Q9C0E2 1151 aaKnown RBP8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 SLC7A5P2Q9GIP4 190 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 OSGEPL1Q9H4B0 414 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 LRRC19Q9H756 370 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 SLC40A1Q9NP59 571 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 KLC4Q9NSK0 619 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 SCHIP1Q9P0W5 487 aaPredicted RBP8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 ZNF624Q9P2J8 865 aaPredicted RBP8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 AJAP1Q9UKB5 411 aaPredicted RBP8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 CAPN11Q9UMQ6 739 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 FHOD1Q9Y613 1164 aa8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 BZW2Q9Y6E2 419 aaKnown RBP8.86□□□□□ -0.99
VPS9D1-205ENST00000565452 C9J4A7 227 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 BHMG1C9JSJ3 638 aaPredicted RBP8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 PCDH17O14917 1159 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 FGF10O15520 208 aaPredicted RBP8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 LDB2O43679 373 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 CAPN1P07384 714 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 FOSL1P15407 271 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 CYP11B1P15538 503 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 FERP16591 822 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 KLK2P20151 261 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 LHCGRP22888 699 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 CDH5P33151 784 aaPredicted RBP8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 KIR3DL1P43629 444 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 CASP6P55212 293 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 KCNK10P57789 538 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 ADCY2Q08462 1091 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 RAB6CQ53S08 254 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 AGAP7PQ5VUJ5 663 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 IRAK1BP1Q5VVH5 260 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 PPP1R2P3Q6NXS1 205 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 GJB7Q6PEY0 223 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 GFRALQ6UXV0 394 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 SPOCD1Q6ZMY3 1216 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 RFLNAQ6ZTI6 216 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 MRGPREQ86SM8 312 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 TSPAN33Q86UF1 283 aa8.85□□□□□ -0.99
VPS9D1-205ENST00000565452 CCDC185Q8N715 623 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms