RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 PAPSS2O95340 614 aaPredicted RBP4.35□□□□□ -1.71
CHD9-215ENST00000565442 ZBTB11O95625 1053 aaPredicted RBP4.35□□□□□ -1.71
CHD9-215ENST00000565442 LIG4P49917 911 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 ISL1P61371 349 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 SLC20A2Q08357 652 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 BAATQ14032 418 aaPredicted RBP4.35□□□□□ -1.71
CHD9-215ENST00000565442 MVPQ14764 893 aaKnown RBP4.35□□□□□ -1.71
CHD9-215ENST00000565442 FAM98BQ52LJ0 330 aaKnown RBP4.35□□□□□ -1.71
CHD9-215ENST00000565442 FAM122CQ6P4D5 195 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 RAD9BQ6WBX8 426 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 TPRG1Q6ZUI0 275 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 SATL1Q86VE3 508 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 SPATA2LQ8IUW3 424 aaPredicted RBP4.35□□□□□ -1.71
CHD9-215ENST00000565442 MAP7D3Q8IWC1 876 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 PM20D2Q8IYS1 436 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 SLC5A8Q8N695 610 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 SLC38A9Q8NBW4 561 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 CCDC191Q8NCU4 936 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 PTPMT1Q8WUK0 201 aaPredicted RBP4.35□□□□□ -1.71
CHD9-215ENST00000565442 DNAAF4Q8WXU2 420 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 NR4A3Q92570 626 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 ABTB1Q969K4 478 aaPredicted RBP4.35□□□□□ -1.71
CHD9-215ENST00000565442 PIGTQ969N2 578 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 ZNF622Q969S3 477 aaKnown RBP eCLIP4.35□□□□□ -1.711e-9■□□□□ 8.3
CHD9-215ENST00000565442 PTERQ96BW5 349 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 WBP1Q96G27 269 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 PPIL3Q9H2H8 161 aaKnown RBP4.35□□□□□ -1.71
CHD9-215ENST00000565442 CHMP1AQ9HD42 196 aaPredicted RBP4.35□□□□□ -1.71
CHD9-215ENST00000565442 TAB2Q9NYJ8 693 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 ZNF224Q9NZL3 707 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 MARCH4Q9P2E8 410 aaPredicted RBP4.35□□□□□ -1.71
CHD9-215ENST00000565442 LARSQ9P2J5 1176 aaKnown RBP4.35□□□□□ -1.71
CHD9-215ENST00000565442 TRPV2Q9Y5S1 764 aa4.35□□□□□ -1.71
CHD9-215ENST00000565442 GPR75-ASB3A0A0A6YYF3 556 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 A0A0G2JPF8 293 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 HNRNPCL3B7ZW38 293 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 CLGNO14967 610 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 SLC16A5O15375 505 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 SLC28A2O43868 658 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 TPOP07202 933 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 HNRNPCL4P0DMR1 293 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 KCNA5P22460 613 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 TNFRSF8P28908 595 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 GNL1P36915 607 aaPredicted RBP4.34□□□□□ -1.71
CHD9-215ENST00000565442 MATR3P43243 847 aaKnown RBP eCLIP4.34□□□□□ -1.71
CHD9-215ENST00000565442 DSCR9P59020 149 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 SEC61A1P61619 476 aaKnown RBP4.34□□□□□ -1.71
CHD9-215ENST00000565442 UBXN2AP68543 259 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 ZXDBP98169 803 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 SLC39A14Q15043 492 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 ZDHHC20Q5W0Z9 365 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 ADALQ6DHV7 355 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 PDXDC1Q6P996 788 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 DENND5BQ6ZUT9 1274 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 INTS8Q75QN2 995 aaKnown RBP4.34□□□□□ -1.71
CHD9-215ENST00000565442 KRT74Q7RTS7 529 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 HAUS6Q7Z4H7 955 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 LDB1Q86U70 411 aaPredicted RBP4.34□□□□□ -1.71
CHD9-215ENST00000565442 GALNT13Q8IUC8 556 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 RNF113BQ8IZP6 322 aaKnown RBP4.34□□□□□ -1.71
CHD9-215ENST00000565442 C1orf87Q8N0U7 546 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 POGLUT1Q8NBL1 392 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 LILRB1Q8NHL6 650 aaPredicted RBP4.34□□□□□ -1.71
CHD9-215ENST00000565442 THAP6Q8TBB0 222 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 TBC1D16Q8TBP0 767 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 LPGAT1Q92604 370 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 MED30Q96HR3 178 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 ADGRG7Q96K78 797 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 DACH2Q96NX9 599 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 TM6SF1Q9BZW5 370 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 SPATC1LQ9H0A9 340 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 CSTL1Q9H114 145 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 KCNK15Q9H427 330 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 GAREM1Q9H706 876 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 SLC35C2Q9NQQ7 365 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 TRMT1Q9NXH9 659 aaKnown RBP4.34□□□□□ -1.71
CHD9-215ENST00000565442 NFKBIL1Q9UBC1 381 aaPredicted RBP4.34□□□□□ -1.71
CHD9-215ENST00000565442 OR2W1Q9Y3N9 320 aa4.34□□□□□ -1.71
CHD9-215ENST00000565442 TMEM184BQ9Y519 407 aaPredicted RBP4.34□□□□□ -1.71
CHD9-215ENST00000565442 PRAG1Q86YV5 1406 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 A0A1W2PP11 408 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 MAGEB17A8MXT2 336 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 HNRNPCL2B2RXH8 293 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 ZNF587BE7ETH6 402 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 TMEM178BH3BS89 294 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 PLK4O00444 970 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 ABCB1P08183 1280 aaPredicted RBP4.33□□□□□ -1.72
CHD9-215ENST00000565442 PLA2G2AP14555 144 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 ITGA2P17301 1181 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 AMPHP49418 695 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 ARSEP51690 589 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 AIMP1Q12904 312 aaKnown RBP4.33□□□□□ -1.72
CHD9-215ENST00000565442 SNTA1Q13424 505 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 ALS2CLQ60I27 953 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 RPUSD3Q6P087 351 aaKnown RBP4.33□□□□□ -1.72
CHD9-215ENST00000565442 GFRALQ6UXV0 394 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 ZNF534Q76KX8 674 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 TMPRSS12Q86WS5 348 aa4.33□□□□□ -1.72
CHD9-215ENST00000565442 GUF1Q8N442 669 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms