RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 PCDHB5Q9Y5E4 795 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 ZFC3H1O60293 1989 aaKnown RBP10.97□□□□□ -0.65
TCF4-222ENST00000564228 A8MU76 341 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 H0Y858 1186 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 ARPC2O15144 300 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 ADAM12O43184 909 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 DLX3O60479 287 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 FGF18O76093 207 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 MAP3K6O95382 1288 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 PTTG1O95997 202 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 HPRP00739 348 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 ELK4P28324 431 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 OR1D2P34982 312 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 NR4A2P43354 598 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 KRR1Q13601 381 aaKnown RBP10.96□□□□□ -0.65
TCF4-222ENST00000564228 POLD3Q15054 466 aaPredicted RBP10.96□□□□□ -0.65
TCF4-222ENST00000564228 PLCL1Q15111 1095 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 C15orf59Q2T9L4 293 aaPredicted RBP10.96□□□□□ -0.65
TCF4-222ENST00000564228 COQ5Q5HYK3 327 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 FAM182AQ5T1J6 154 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 SDHAF4Q5VUM1 108 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 RNF19BQ6ZMZ0 732 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 DDX53Q86TM3 631 aaKnown RBP10.96□□□□□ -0.65
TCF4-222ENST00000564228 BPHLQ86WA6 291 aaPredicted RBP10.96□□□□□ -0.65
TCF4-222ENST00000564228 ZDHHC17Q8IUH5 632 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 SPPL2CQ8IUH8 684 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 OR7A2PQ8NGA2 310 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 MAGEE2Q8TD90 523 aaPredicted RBP10.96□□□□□ -0.65
TCF4-222ENST00000564228 AUTS2Q8WXX7 1259 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 KCTD13Q8WZ19 329 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 ZNF669Q96BR6 464 aaPredicted RBP10.96□□□□□ -0.65
TCF4-222ENST00000564228 MFSD3Q96ES6 412 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 ELMO2Q96JJ3 720 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 SCYL1Q96KG9 808 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 MUS81Q96NY9 551 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 ULBP1Q9BZM6 244 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 CAB39LQ9H9S4 337 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 CSNK1G1Q9HCP0 422 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 TLR9Q9NR96 1032 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.96□□□□□ -0.65
TCF4-222ENST00000564228 GPATCH2LQ9NWQ4 482 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 CCDC167Q9P0B6 97 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 TBC1D14Q9P2M4 693 aa10.96□□□□□ -0.65
TCF4-222ENST00000564228 MYO18AQ92614 2054 aaKnown RBP10.96□□□□□ -0.65
TCF4-222ENST00000564228 MTMR11A4FU01 709 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 CARNS1A5YM72 827 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 GRXCR1A8MXD5 290 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 HHLA1C9JL84 531 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 TBC1D4O60343 1298 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 GPC4O75487 556 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 UPK1BO75841 260 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 SOAT2O75908 522 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 URODP06132 367 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 USP17L7P0C7H9 530 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 LINC00271P0C7V0 271 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 MYOGP15173 224 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 IL12AP29459 219 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 OXTRP30559 389 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 SHMT2P34897 504 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 CTNNB1P35222 781 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 RPL34P49207 117 aaKnown RBP10.96□□□□□ -0.66
TCF4-222ENST00000564228 GPR15P49685 360 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 KPNA2P52292 529 aaKnown RBP10.96□□□□□ -0.66
TCF4-222ENST00000564228 GNG2P59768 71 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 EPS8Q12929 822 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 GPR17Q13304 367 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 ACOX1Q15067 660 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 SHHQ15465 462 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 CA9Q16790 459 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 DDR2Q16832 855 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 FAM109BQ6ICB4 259 aaPredicted RBP10.96□□□□□ -0.66
TCF4-222ENST00000564228 R3HCC1LQ7Z5L2 792 aaKnown RBP10.96□□□□□ -0.66
TCF4-222ENST00000564228 PTRH1Q86Y79 214 aaKnown RBP10.96□□□□□ -0.66
TCF4-222ENST00000564228 C8orf59Q8N0T1 100 aaPredicted RBP10.96□□□□□ -0.66
TCF4-222ENST00000564228 SPERTQ8NA61 448 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 SIMC1Q8NDZ2 872 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 RHOXF1Q8NHV9 184 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 CLP1Q92989 425 aaKnown RBP10.96□□□□□ -0.66
TCF4-222ENST00000564228 FUBP3Q96I24 572 aaKnown RBP eCLIP10.96□□□□□ -0.66
TCF4-222ENST00000564228 SEPT5Q99719 369 aaPredicted RBP10.96□□□□□ -0.66
TCF4-222ENST00000564228 BDH2Q9BUT1 245 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 RNF38Q9H0F5 515 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 NOL6Q9H6R4 1146 aaKnown RBP10.96□□□□□ -0.66
TCF4-222ENST00000564228 EML4Q9HC35 981 aaKnown RBP10.96□□□□□ -0.66
TCF4-222ENST00000564228 PCDH12Q9NPG4 1184 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 CNGB3Q9NQW8 809 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 PAK1IP1Q9NWT1 392 aaPredicted RBP10.96□□□□□ -0.66
TCF4-222ENST00000564228 ANAPC2Q9UJX6 822 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 PCDHGB1Q9Y5G3 927 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 SNX5Q9Y5X3 404 aa10.96□□□□□ -0.66
TCF4-222ENST00000564228 ZCWPW2A0A1B0GU75 182 aa10.95□□□□□ -0.66
TCF4-222ENST00000564228 LOC105371267A0A1B0GV96 52 aa10.95□□□□□ -0.66
TCF4-222ENST00000564228 TCRBV5S2A0A599 114 aa10.95□□□□□ -0.66
TCF4-222ENST00000564228 TMEM233B4DJY2 109 aa10.95□□□□□ -0.66
TCF4-222ENST00000564228 M0R3G1 203 aa10.95□□□□□ -0.66
TCF4-222ENST00000564228 TAF4O00268 1085 aa10.95□□□□□ -0.66
TCF4-222ENST00000564228 TPST1O60507 370 aa10.95□□□□□ -0.66
TCF4-222ENST00000564228 NDUFS2O75306 463 aa10.95□□□□□ -0.66
TCF4-222ENST00000564228 NADKO95544 446 aaPredicted RBP10.95□□□□□ -0.66
TCF4-222ENST00000564228 CDH1P12830 882 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms