RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 CATSPERBQ9H7T0 1116 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 KCTD5Q9NXV2 234 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 TRIM10Q9UDY6 481 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 TBC1D29Q9UFV1 150 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 GUCA1BQ9UMX6 200 aa15.68■□□□□ 0.1
RNF40-205ENST00000563909 FARSAQ9Y285 508 aaKnown RBP15.68■□□□□ 0.1
RNF40-205ENST00000563909 ANKHD1Q8IWZ3 2542 aaKnown RBP15.68■□□□□ 0.1
RNF40-205ENST00000563909 A0A0U1RQJ8 604 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 WASH4PA8MWX3 477 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 J3KR12 359 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 EEF2KO00418 725 aaKnown RBP15.67■□□□□ 0.1
RNF40-205ENST00000563909 TOX3O15405 576 aaPredicted RBP15.67■□□□□ 0.1
RNF40-205ENST00000563909 ZSCAN12O43309 604 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 TMEM63AO94886 807 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 TYRP1P17643 537 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 LPOP22079 712 aaPredicted RBP15.67■□□□□ 0.1
RNF40-205ENST00000563909 CSNK1DP48730 415 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 HCAR3P49019 387 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 TPI1P60174 286 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 LAMB3Q13751 1172 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 TESK1Q15569 626 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 DPYSL2Q16555 572 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 CA9Q16790 459 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 ZFYVE27Q5T4F4 411 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 TXNRD3NBQ6F5E7 133 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 SPNS3Q6ZMD2 512 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 HSD11B1LQ7Z5J1 315 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 TRIM74Q86UV6 250 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 CPNE8Q86YQ8 564 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 ST6GALNAC3Q8NDV1 305 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 KCTD15Q96SI1 283 aaPredicted RBP15.67■□□□□ 0.1
RNF40-205ENST00000563909 SMAD5Q99717 465 aaKnown RBP15.67■□□□□ 0.1
RNF40-205ENST00000563909 BARD1Q99728 777 aaKnown RBP15.67■□□□□ 0.1
RNF40-205ENST00000563909 ILKAPQ9H0C8 392 aaPredicted RBP15.67■□□□□ 0.1
RNF40-205ENST00000563909 PDFQ9HBH1 243 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.67■□□□□ 0.1
RNF40-205ENST00000563909 COPG2Q9UBF2 871 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 ZNHIT2Q9UHR6 403 aa15.67■□□□□ 0.1
RNF40-205ENST00000563909 H3BRJ5 948 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 FGF10O15520 208 aaPredicted RBP15.66■□□□□ 0.1
RNF40-205ENST00000563909 DAPK3O43293 454 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 KIF1CO43896 1103 aaKnown RBP15.66■□□□□ 0.1
RNF40-205ENST00000563909 PRAMEF11O60813 436 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 TEAD1P28347 426 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 PTGER4P35408 488 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 GJC1P36383 396 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 ARL4AP40617 200 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 GPR1P46091 355 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 KRT81Q14533 505 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 PDK2Q15119 407 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 PPP6R3Q5H9R7 873 aaPredicted RBP15.66■□□□□ 0.1
RNF40-205ENST00000563909 PWWP2BQ6NUJ5 590 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 Q6ZVL8 140 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 MAP7D3Q8IWC1 876 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 KCTD6Q8NC69 237 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 TSEN2Q8NCE0 465 aaKnown RBP15.66■□□□□ 0.1
RNF40-205ENST00000563909 LRRC19Q9H756 370 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 LZTFL1Q9NQ48 299 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 DDX56Q9NY93 547 aaKnown RBP15.66■□□□□ 0.1
RNF40-205ENST00000563909 OGFRQ9NZT2 677 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 CPNE7Q9UBL6 633 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 NTNG1Q9Y2I2 539 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.66■□□□□ 0.1
RNF40-205ENST00000563909 PRKAB1Q9Y478 270 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 HYOU1Q9Y4L1 999 aa15.66■□□□□ 0.1
RNF40-205ENST00000563909 GRID2IPA4D2P6 1211 aa15.65■□□□□ 0.1
RNF40-205ENST00000563909 PSTPIP1O43586 416 aa15.65■□□□□ 0.1
RNF40-205ENST00000563909 SNX2O60749 519 aa15.65■□□□□ 0.1
RNF40-205ENST00000563909 PALMO75781 387 aa15.65■□□□□ 0.1
RNF40-205ENST00000563909 HEXIM1O94992 359 aaKnown RBP15.65■□□□□ 0.1
RNF40-205ENST00000563909 SNRPB2P08579 225 aaKnown RBP15.65■□□□□ 0.1
RNF40-205ENST00000563909 CDH6P55285 790 aa15.65■□□□□ 0.1
RNF40-205ENST00000563909 ATP13A4Q4VNC1 1196 aa15.65■□□□□ 0.1
RNF40-205ENST00000563909 ODF2Q5BJF6 829 aa15.65■□□□□ 0.1
RNF40-205ENST00000563909 CRB2Q5IJ48 1285 aa15.65■□□□□ 0.1
RNF40-205ENST00000563909 CHST15Q7LFX5 561 aaPredicted RBP15.65■□□□□ 0.1
RNF40-205ENST00000563909 CBARPQ8N350 705 aaPredicted RBP15.65■□□□□ 0.1
RNF40-205ENST00000563909 LZTR1Q8N653 840 aa15.65■□□□□ 0.1
RNF40-205ENST00000563909 LRRC57Q8N9N7 239 aa15.65■□□□□ 0.1
RNF40-205ENST00000563909 GLIS1Q8NBF1 620 aa15.65■□□□□ 0.1
RNF40-205ENST00000563909 FAM71BQ8TC56 605 aa15.65■□□□□ 0.1
RNF40-205ENST00000563909 ADAMTS17Q8TE56 1095 aa15.65■□□□□ 0.1
RNF40-205ENST00000563909 CELF6Q96J87 481 aaKnown RBP15.65■□□□□ 0.1
RNF40-205ENST00000563909 PCDH18Q9HCL0 1135 aa15.65■□□□□ 0.1
RNF40-205ENST00000563909 PDE7BQ9NP56 450 aa15.65■□□□□ 0.1
RNF40-205ENST00000563909 AGPAT4Q9NRZ5 378 aa15.65■□□□□ 0.1
RNF40-205ENST00000563909 CWC15Q9P013 229 aaKnown RBP15.65■□□□□ 0.1
RNF40-205ENST00000563909 C5AR2Q9P296 337 aa15.65■□□□□ 0.1
RNF40-205ENST00000563909 AMFRQ9UKV5 643 aa15.65■□□□□ 0.1
RNF40-205ENST00000563909 LILRA5A6NI73 299 aa15.64■□□□□ 0.09
RNF40-205ENST00000563909 TRAFD1O14545 582 aaPredicted RBP15.64■□□□□ 0.09
RNF40-205ENST00000563909 UBXN7O94888 489 aa15.64■□□□□ 0.09
RNF40-205ENST00000563909 TNNT1P13805 278 aa15.64■□□□□ 0.09
RNF40-205ENST00000563909 VIPR1P32241 457 aa15.64■□□□□ 0.09
RNF40-205ENST00000563909 GLRBP48167 497 aa15.64■□□□□ 0.09
RNF40-205ENST00000563909 ARSEP51690 589 aa15.64■□□□□ 0.09
RNF40-205ENST00000563909 PDE1BQ01064 536 aa15.64■□□□□ 0.09
RNF40-205ENST00000563909 CACHD1Q5VU97 1274 aa15.64■□□□□ 0.09
RNF40-205ENST00000563909 LYPLAL1Q5VWZ2 237 aa15.64■□□□□ 0.09
RNF40-205ENST00000563909 ADAMTSL4Q6UY14 1074 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms