RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 PCDHGA4Q9Y5G9 962 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 PCDHGA3Q9Y5H0 932 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 ARL5AQ9Y689 179 aa17.4■□□□□ 0.38
NME3-205ENST00000563854 LILRA5A6NI73 299 aa17.39■□□□□ 0.37
NME3-205ENST00000563854 STX7O15400 261 aaKnown RBP17.39■□□□□ 0.37
NME3-205ENST00000563854 ANXA9O76027 345 aa17.39■□□□□ 0.37
NME3-205ENST00000563854 RBP3P10745 1247 aa17.39■□□□□ 0.37
NME3-205ENST00000563854 AMD1P17707 334 aa17.39■□□□□ 0.37
NME3-205ENST00000563854 WT1P19544 449 aaPredicted RBP17.39■□□□□ 0.37
NME3-205ENST00000563854 IDSP22304 550 aa17.39■□□□□ 0.37
NME3-205ENST00000563854 AKT1P31749 480 aa17.39■□□□□ 0.37
NME3-205ENST00000563854 SLC19A1P41440 591 aa17.39■□□□□ 0.37
NME3-205ENST00000563854 VAV2P52735 878 aa17.39■□□□□ 0.37
NME3-205ENST00000563854 GFERP55789 205 aa17.39■□□□□ 0.37
NME3-205ENST00000563854 RAB15P59190 212 aa17.39■□□□□ 0.37
NME3-205ENST00000563854 CYP4F2P78329 520 aa17.39■□□□□ 0.37
NME3-205ENST00000563854 PRPSAP1Q14558 356 aa17.39■□□□□ 0.37
NME3-205ENST00000563854 WBP1Q96G27 269 aa17.39■□□□□ 0.37
NME3-205ENST00000563854 CALR3Q96L12 384 aaKnown RBP17.39■□□□□ 0.37
NME3-205ENST00000563854 TGM7Q96PF1 710 aa17.39■□□□□ 0.37
NME3-205ENST00000563854 GORASP1Q9BQQ3 440 aa17.39■□□□□ 0.37
NME3-205ENST00000563854 ARHGAP9Q9BRR9 750 aa17.39■□□□□ 0.37
NME3-205ENST00000563854 ASPSCR1Q9BZE9 553 aa17.39■□□□□ 0.37
NME3-205ENST00000563854 B3GNT4Q9C0J1 378 aa17.39■□□□□ 0.37
NME3-205ENST00000563854 ZNF624Q9P2J8 865 aaPredicted RBP17.39■□□□□ 0.37
NME3-205ENST00000563854 SDK2Q58EX2 2172 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 GRID2IPA4D2P6 1211 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 OR2AG2A6NM03 316 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 B4E171 279 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.38■□□□□ 0.37
NME3-205ENST00000563854 UBXN7O94888 489 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 BRAFP15056 766 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 XRCC1P18887 633 aaPredicted RBP17.38■□□□□ 0.37
NME3-205ENST00000563854 FECHP22830 423 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 CA5AP35218 305 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 TSPAN7P41732 249 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 HALP42357 657 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 ITGA9Q13797 1035 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 ANKRD20A2Q5SQ80 823 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 LDLRAP1Q5SW96 308 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 GPRC6AQ5T6X5 926 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 ANKRD20A1Q5TYW2 823 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 ANKRD20A3Q5VUR7 823 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 TMEM26Q6ZUK4 368 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 DET1Q7L5Y6 550 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 ARHGAP22Q7Z5H3 698 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 ZNF605Q86T29 641 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 PLXDC1Q8IUK5 500 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 CACNA2D3Q8IZS8 1091 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 RASGEF1AQ8N9B8 481 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 CCDC110Q8TBZ0 833 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 BRSK1Q8TDC3 778 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 ALG3Q92685 438 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 EXTL1Q92935 676 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 RNF31Q96EP0 1072 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 BAG1Q99933 345 aaPredicted RBP17.38■□□□□ 0.37
NME3-205ENST00000563854 EPB41L1Q9H4G0 881 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 PDP2Q9P2J9 529 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 FAM8A1Q9UBU6 413 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 PSMD13Q9UNM6 376 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 SLC30A1Q9Y6M5 507 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 AHCTF1Q8WYP5 2266 aa17.38■□□□□ 0.37
NME3-205ENST00000563854 BTNL10A8MVZ5 291 aa17.37■□□□□ 0.37
NME3-205ENST00000563854 RAD1O60671 282 aa17.37■□□□□ 0.37
NME3-205ENST00000563854 TJP3O95049 919 aa17.37■□□□□ 0.37
NME3-205ENST00000563854 PRAMEF1O95521 474 aa17.37■□□□□ 0.37
NME3-205ENST00000563854 PYGMP11217 842 aa17.37■□□□□ 0.37
NME3-205ENST00000563854 MSH3P20585 1137 aa17.37■□□□□ 0.37
NME3-205ENST00000563854 CTSCP53634 463 aa17.37■□□□□ 0.37
NME3-205ENST00000563854 TMEM220Q6QAJ8 160 aa17.37■□□□□ 0.37
NME3-205ENST00000563854 C11orf96Q7Z7L8 435 aa17.37■□□□□ 0.37
NME3-205ENST00000563854 BMPERQ8N8U9 685 aa17.37■□□□□ 0.37
NME3-205ENST00000563854 NAT14Q8WUY8 206 aa17.37■□□□□ 0.37
NME3-205ENST00000563854 NKD1Q969G9 470 aa17.37■□□□□ 0.37
NME3-205ENST00000563854 DESI2Q9BSY9 194 aa17.37■□□□□ 0.37
NME3-205ENST00000563854 APMAPQ9HDC9 416 aa17.37■□□□□ 0.37
NME3-205ENST00000563854 POT1Q9NUX5 634 aa17.37■□□□□ 0.37
NME3-205ENST00000563854 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.37■□□□□ 0.37
NME3-205ENST00000563854 OGFRQ9NZT2 677 aa17.37■□□□□ 0.37
NME3-205ENST00000563854 AMFRQ9UKV5 643 aa17.37■□□□□ 0.37
NME3-205ENST00000563854 PACSIN2Q9UNF0 486 aaPredicted RBP17.37■□□□□ 0.37
NME3-205ENST00000563854 EFR3BQ9Y2G0 817 aa17.37■□□□□ 0.37
NME3-205ENST00000563854 C2orf81A6NN90 581 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 GAPDHSO14556 408 aaPredicted RBP17.36■□□□□ 0.37
NME3-205ENST00000563854 POP7O75817 140 aaKnown RBP17.36■□□□□ 0.37
NME3-205ENST00000563854 RASSF9O75901 435 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 LPOP22079 712 aaPredicted RBP17.36■□□□□ 0.37
NME3-205ENST00000563854 PTPN7P35236 360 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 SEPHS1P49903 392 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 TMPRSS15P98073 1019 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 MC2RQ01718 297 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 FOXM1Q08050 763 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 GPR18Q14330 331 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 SPARCL1Q14515 664 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 CLCA4Q14CN2 919 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 FNBP1LQ5T0N5 605 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 ABRAXAS1Q6UWZ7 409 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 CEACAM20Q6UY09 585 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 PEX26Q7Z412 305 aa17.36■□□□□ 0.37
NME3-205ENST00000563854 AMZ2Q86W34 360 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms