RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 SERPIND1P05546 499 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 CES1P23141 567 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 HTR7P34969 479 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 ECT2LQ008S8 904 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 KCNC4Q03721 635 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 TMEM26Q6ZUK4 368 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 LRRC8DQ7L1W4 858 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 CLEC14AQ86T13 490 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 MINDY2Q8NBR6 621 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 CDKN2AIPNLQ96HQ2 116 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 COMMD8Q9NX08 183 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 GABRQQ9UN88 632 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 SOCS2O14508 198 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 NIPSNAP2O75323 286 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 CLDN11O75508 207 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 OR4F21O95013 312 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 ALOX5P09917 674 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 NCK1P16333 377 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 PAX3P23760 479 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 PCYT1AP49585 367 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 ST8SIA6P61647 398 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 GRSF1Q12849 480 aaKnown RBP eCLIP10.36□□□□□ -0.75
RNF40-204ENST00000563683 CRY1Q16526 586 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 MAPKAPK3Q16644 382 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 MSANTD2Q6P1R3 559 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 GCNT7Q6ZNI0 430 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 HORMAD1Q86X24 394 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 CBR4Q8N4T8 237 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 SIDT2Q8NBJ9 832 aaKnown RBP10.36□□□□□ -0.75
RNF40-204ENST00000563683 SELENOMQ8WWX9 145 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 TAMM41Q96BW9 452 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 EFHD2Q96C19 240 aaPredicted RBP10.36□□□□□ -0.75
RNF40-204ENST00000563683 MRGPRX2Q96LB1 330 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 EVLQ9UI08 416 aaPredicted RBP10.36□□□□□ -0.75
RNF40-204ENST00000563683 DAPK2Q9UIK4 370 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 PRMT5O14744 637 aaPredicted RBP10.35□□□□□ -0.75
RNF40-204ENST00000563683 GABRDO14764 452 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 TRIM24O15164 1050 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 INSIG1O15503 277 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 CD1EP15812 388 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 GSSP48637 474 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 PLCL1Q15111 1095 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 ZNF789Q5FWF6 425 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 KIAA0319Q5VV43 1072 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 KCTD8Q6ZWB6 473 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 ZDHHC13Q8IUH4 622 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 STK40Q8N2I9 435 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 MED8Q96G25 268 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 CDK15Q96Q40 435 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 KCNA7Q96RP8 456 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 AKTIPQ9H8T0 292 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 SMOXQ9NWM0 555 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 EIF2B4Q9UI10 523 aaKnown RBP10.35□□□□□ -0.75
RNF40-204ENST00000563683 INVSQ9Y283 1065 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 TNPO3Q9Y5L0 923 aaKnown RBP10.35□□□□□ -0.75
RNF40-204ENST00000563683 THSD7AQ9UPZ6 1657 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 A0A0D9SEW6 157 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 TRIM64A6NGJ6 449 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 CNPP09543 421 aaKnown RBP10.35□□□□□ -0.75
RNF40-204ENST00000563683 IMPDH1P20839 514 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 CCND3P30281 292 aaPredicted RBP10.35□□□□□ -0.75
RNF40-204ENST00000563683 ACLYP53396 1101 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 RPS3AP61247 264 aaKnown RBP10.35□□□□□ -0.75
RNF40-204ENST00000563683 NFATC3Q12968 1075 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 TRIM32Q13049 653 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 LCP2Q13094 533 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 INAQ16352 499 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 THOC7Q6I9Y2 204 aaKnown RBP10.35□□□□□ -0.75
RNF40-204ENST00000563683 SLC44A2Q8IWA5 706 aaPredicted RBP10.35□□□□□ -0.75
RNF40-204ENST00000563683 TTC30BQ8N4P2 665 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 OSCP1Q8WVF1 389 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 SLCO4A1Q96BD0 722 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 FUBP3Q96I24 572 aaKnown RBP eCLIP10.35□□□□□ -0.75
RNF40-204ENST00000563683 SARDHQ9UL12 918 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 FCF1Q9Y324 198 aaKnown RBP10.35□□□□□ -0.75
RNF40-204ENST00000563683 GNG14A0A1W2PPG7 69 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 HS6ST1O60243 411 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 DGKAP23743 735 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 SCAPQ12770 1279 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 ATXN7L2Q5T6C5 722 aaPredicted RBP10.35□□□□□ -0.75
RNF40-204ENST00000563683 HMBOX1Q6NT76 420 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 ADCK2Q7Z695 626 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 CILP2Q8IUL8 1156 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 SLC15A4Q8N697 577 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 TMCO5AQ8N6Q1 288 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 VPS37AQ8NEZ2 397 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 ARHGAP39Q9C0H5 1083 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 RNF208Q9H0X6 261 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 CACNA2D2Q9NY47 1150 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 GALPQ9UBC7 116 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 NME7Q9Y5B8 376 aa10.35□□□□□ -0.75
RNF40-204ENST00000563683 J3QRK9 145 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 ENPP3O14638 875 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 RGS14O43566 566 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 CLPXO76031 633 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 LRATO95237 230 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 IGSF6O95976 241 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 ABCB1P08183 1280 aaPredicted RBP10.34□□□□□ -0.75
RNF40-204ENST00000563683 HSPA7P48741 367 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 ARSDP51689 593 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms