RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 GSDMDP57764 484 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 BPIFB4P59827 614 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 LBRQ14739 615 aaKnown RBP7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 NCF4Q15080 339 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 GPR19Q15760 415 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 KYNUQ16719 465 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 DCAF10Q5QP82 559 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 HENMT1Q5T8I9 393 aaKnown RBP7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 ZNF385CQ66K41 422 aaPredicted RBP7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 ZNF324BQ6AW86 544 aaPredicted RBP7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 WDR59Q6PJI9 974 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 IGFL2Q6UWQ7 119 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 USP45Q70EL2 814 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 MRGPREQ86SM8 312 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 KMT5CQ86Y97 462 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 GALNT16Q8N428 558 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 ZADH2Q8N4Q0 377 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 ZNF808Q8N4W9 903 aaPredicted RBP7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 ANKK1Q8NFD2 765 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 EPS8L1Q8TE68 723 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 PPP4R1Q8TF05 950 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 SMARCE1Q969G3 411 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 C14orf79Q96F83 325 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 CCDC120Q96HB5 630 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 TRAPPC9Q96Q05 1148 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 MGME1Q9BQP7 344 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 CARD9Q9H257 536 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 PDCL3Q9H2J4 239 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 SP110Q9HB58 689 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 KCND1Q9NSA2 647 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 KLC4Q9NSK0 619 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 PCMTD2Q9NV79 361 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 ATXN10Q9UBB4 475 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 MAN1B1Q9UKM7 699 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 CTNND2Q9UQB3 1225 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 ZDHHC9Q9Y397 364 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 NSD1Q96L73 2696 aaPredicted RBP7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 A0A0J9YYE9 177 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 TCRBV5S1A1TA0A578 114 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 BICDL2A1A5D9 508 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 OR52A4PA6NMU1 304 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 C3orf80F5H4A9 247 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 CHUKO15111 745 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 KCNN4O15554 427 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 IPO13O94829 963 aaKnown RBP7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 TRBC1P01850 177 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 ALPPP05187 535 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 KLK3P07288 261 aaPredicted RBP7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 CD1EP15812 388 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 ZNF30P17039 623 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 HTR7P34969 479 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 KIR3DL1P43629 444 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 AIF1P55008 147 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 TPI1P60174 286 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 TUBB4BP68371 445 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 KRT85P78386 507 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 OTUD4Q01804 1114 aaKnown RBP7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 STIM1Q13586 685 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 TUBB2AQ13885 445 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 HIF1AQ16665 826 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 CA9Q16790 459 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 SMTNL2Q2TAL5 461 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 ZNF648Q5T619 568 aaPredicted RBP7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 ERICH6BQ5W0A0 696 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 MRGPRGQ86SM5 289 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 RAB43Q86YS6 212 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 TMEM126BQ8IUX1 230 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 PHYKPLQ8IUZ5 450 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 TMEM151BQ8IW70 566 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 PARP9Q8IXQ6 854 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 RAVER1Q8IY67 606 aaKnown RBP7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 SYTL1Q8IYJ3 562 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 ACBD4Q8NC06 268 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 MSANTD4Q8NCY6 345 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 GPR150Q8NGU9 434 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 OR8K5Q8NH50 307 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 ZNF599Q96NL3 588 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 AGAP3Q96P47 875 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 WDR77Q9BQA1 342 aaPredicted RBP7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 C11orf70Q9BRQ4 267 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 TUBB2BQ9BVA1 445 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 NAA15Q9BXJ9 866 aaKnown RBP7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 OSGEPL1Q9H4B0 414 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 FAM207AQ9NSI2 230 aaPredicted RBP7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 DTLQ9NZJ0 730 aa7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 NOCTQ9UK39 431 aaKnown RBP7.55□□□□□ -1.2
HERPUD1-206ENST00000563343 FLNAP21333 2647 aaKnown RBP7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 CCDC78A2IDD5 438 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 TLCD2A6NGC4 264 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 SMAPO00193 183 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 DFFAO00273 331 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 PCDH17O14917 1159 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 JRKO75564 520 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 FAM155BO75949 473 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 SMC2O95347 1197 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 LCA5LO95447 670 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 NADKO95544 446 aaPredicted RBP7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 KRT3P12035 628 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 CHRNB2P17787 502 aa7.54□□□□□ -1.2
HERPUD1-206ENST00000563343 ERCC2P18074 760 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms