RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ACSBG2Q5FVE4 666 aa17.81■□□□□ 0.44
COMMD4-208ENST00000563220 MAVSQ7Z434 540 aa17.81■□□□□ 0.44
COMMD4-208ENST00000563220 RAVER1Q8IY67 606 aaKnown RBP17.81■□□□□ 0.44
COMMD4-208ENST00000563220 PLCD3Q8N3E9 789 aa17.81■□□□□ 0.44
COMMD4-208ENST00000563220 DDHD1Q8NEL9 900 aa17.81■□□□□ 0.44
COMMD4-208ENST00000563220 RAB7BQ96AH8 199 aa17.81■□□□□ 0.44
COMMD4-208ENST00000563220 GABRG3Q99928 467 aa17.81■□□□□ 0.44
COMMD4-208ENST00000563220 SHCBP1LQ9BZQ2 653 aa17.81■□□□□ 0.44
COMMD4-208ENST00000563220 KDM4CQ9H3R0 1056 aa17.81■□□□□ 0.44
COMMD4-208ENST00000563220 C8orf33Q9H7E9 229 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-208ENST00000563220 SPATS2LQ9NUQ6 558 aaKnown RBP17.81■□□□□ 0.44
COMMD4-208ENST00000563220 SERGEFQ9UGK8 458 aa17.81■□□□□ 0.44
COMMD4-208ENST00000563220 TSR3Q9UJK0 312 aaKnown RBP17.81■□□□□ 0.44
COMMD4-208ENST00000563220 SGTAO43765 313 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 RNASEH1O60930 286 aaKnown RBP17.8■□□□□ 0.44
COMMD4-208ENST00000563220 SMIM24O75264 130 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 SOD1P00441 154 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 AKT1P31749 480 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 TAS2R38P59533 333 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 E2F5Q15329 346 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 PFKFB4Q16877 469 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 CFAP157Q5JU67 520 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-208ENST00000563220 PIWIL4Q7Z3Z4 852 aaKnown RBP17.8■□□□□ 0.44
COMMD4-208ENST00000563220 WDR75Q8IWA0 830 aaKnown RBP17.8■□□□□ 0.44
COMMD4-208ENST00000563220 ZBTB2Q8N680 514 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 PTGR2Q8N8N7 351 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-208ENST00000563220 DCUN1D1Q96GG9 259 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 CNDP1Q96KN2 507 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 VPS35Q96QK1 796 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 EBF4Q9BQW3 602 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 ILKAPQ9H0C8 392 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-208ENST00000563220 ZDHHC2Q9UIJ5 367 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 CNOT6Q9ULM6 557 aaKnown RBP17.8■□□□□ 0.44
COMMD4-208ENST00000563220 RAP2CQ9Y3L5 183 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 CAPN7Q9Y6W3 813 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 PRUNE2Q8WUY3 3088 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 NARSO43776 548 aaKnown RBP17.8■□□□□ 0.44
COMMD4-208ENST00000563220 LZTS3O60299 673 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-208ENST00000563220 OR56A5P0C7T3 313 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 CCR7P32248 378 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 HK3P52790 923 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 RPS14P62263 151 aaKnown RBP17.8■□□□□ 0.44
COMMD4-208ENST00000563220 UNC50Q53HI1 259 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 ZNF678Q5SXM1 525 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 AGBL4Q5VU57 503 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 CYHR1Q6ZMK1 362 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 OR2T3Q8NH03 318 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 AGR3Q8TD06 166 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 GLYATL1Q969I3 302 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 PANX3Q96QZ0 392 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 MKRN2Q9H000 416 aaKnown RBP17.8■□□□□ 0.44
COMMD4-208ENST00000563220 HEY2Q9UBP5 337 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 HAO1Q9UJM8 370 aa17.8■□□□□ 0.44
COMMD4-208ENST00000563220 PLXNB3Q9ULL4 1909 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 LRRC14BA6NHZ5 514 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 SHISA7A6NL88 538 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 SUPT3HB4E1H0 165 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 K7ESM1 405 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 SUPT3HO75486 399 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 UBOX5O94941 541 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 KLF8O95600 359 aaPredicted RBP17.79■□□□□ 0.44
COMMD4-208ENST00000563220 ADH1BP00325 375 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 C5AR1P21730 350 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 DGKAP23743 735 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 GALNTL6Q49A17 601 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 MTDHQ86UE4 582 aaKnown RBP17.79■□□□□ 0.44
COMMD4-208ENST00000563220 HDDC3Q8N4P3 179 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 CXorf40AQ8TE69 158 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 DNASE1L2Q92874 299 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 NUS1Q96E22 293 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 L3HYPDHQ96EM0 354 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 LRRC37BQ96QE4 947 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 MYLK2Q9H1R3 596 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 GSTO2Q9H4Y5 243 aa17.79■□□□□ 0.44
COMMD4-208ENST00000563220 A0A1W2PP55 124 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 A0A1W2PQF6 199 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 INPP4BO15327 924 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 SIX3O95343 332 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-208ENST00000563220 GFAPP14136 432 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 ALOX15P16050 662 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-208ENST00000563220 MSH3P20585 1137 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 COL9A1P20849 921 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 DRD1P21728 446 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 SERPINB3P29508 390 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 HERVK_113P63132 956 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 GRSF1Q12849 480 aaKnown RBP eCLIP17.78■□□□□ 0.44
COMMD4-208ENST00000563220 PRKAA1Q13131 559 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 ZNF776Q68DI1 518 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-208ENST00000563220 Q7L0L9 218 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 ZNF765Q7L2R6 523 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 KCNV2Q8TDN2 545 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 CDX2Q99626 313 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-208ENST00000563220 ERVK-6Q9BXR3 956 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 SLC6A17Q9H1V8 727 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 KLHL42Q9P2K6 505 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 CCDC189A1A4V9 331 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 NCF1BA6NI72 391 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-208ENST00000563220 SYCE1LA8MT33 242 aa17.78■□□□□ 0.44
COMMD4-208ENST00000563220 NCF1CA8MVU1 366 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms