RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 TOR1AIP2Q8NFQ8 470 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 SOCS4Q8WXH5 440 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 SENP8Q96LD8 212 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 TOR4AQ9NXH8 423 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 SLC39A10Q9ULF5 831 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 PDCD11Q14690 1871 aaKnown RBP13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 A0A1W2PQ72 361 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 C12orf71A8MTZ7 269 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 HAT1O14929 419 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 APOA4P06727 396 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 HNRNPLP14866 589 aaKnown RBP eCLIP13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 GLULP15104 373 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 NCK1P16333 377 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 CD52P31358 61 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 TGFBR1P36897 503 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 PRKCZQ05513 592 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 PCBP1Q15365 356 aaKnown RBP eCLIP13.9□□□□□ -0.184e-6■■□□□ 12.9
GTF3C1-203ENST00000562609 PYCR3Q53H96 274 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 SLC26A9Q7LBE3 791 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 CLEC4FQ8N1N0 589 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 FAM109AQ8N4B1 249 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 PSD4Q8NDX1 1056 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 BIRC7Q96CA5 298 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 HSFY1Q96LI6 401 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 FCRL3Q96P31 734 aaPredicted RBP13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 ATP13A2Q9NQ11 1180 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 MAGED1Q9Y5V3 778 aaPredicted RBP13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 A0A0G2JMP0 313 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 A0A0X1KG70 313 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 FAM25AB3EWG3 89 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 FAM25CB3EWG5 89 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 FAM25GB3EWG6 89 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 DLX3O60479 287 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 THRBP10828 461 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 NAGAP17050 411 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 ALOX12P18054 663 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 PNPLA4P41247 253 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 HTR3AP46098 478 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 SULT1E1P49888 294 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 ARSFP54793 590 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 CTAG1AP78358 180 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 P2RY8Q86VZ1 359 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 SYTL1Q8IYJ3 562 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 RDH11Q8TC12 318 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 GIPC2Q8TF65 315 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 TNIP3Q96KP6 325 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 TSNARE1Q96NA8 513 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 KCTD15Q96SI1 283 aaPredicted RBP13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 OMDQ99983 421 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 NARFLQ9H6Q4 476 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 CRTAC1Q9NQ79 661 aa13.9□□□□□ -0.18
GTF3C1-203ENST00000562609 TTC3P53804 2025 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 ARL5CA6NH57 179 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 F8W810 466 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 DPYSL4O14531 572 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 SSX4O60224 188 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 DNAJB5O75953 348 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 TRIM16O95361 564 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 ASGR1P07306 291 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 SLC10A3P09131 477 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 MLNP12872 115 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 FSHRP23945 695 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 CCND3P30281 292 aaPredicted RBP13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 PTGS2P35354 604 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 GRIK1P39086 918 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 C1QTNF8P60827 252 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 EMX1Q04741 257 aaPredicted RBP13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 DGCR6Q14129 220 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 CTU2Q2VPK5 515 aaKnown RBP13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 Q5BKY6 102 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 TRAF7Q6Q0C0 670 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 CLEC20AQ6ZU45 233 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 GPRIN1Q7Z2K8 1008 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 ZNF438Q7Z4V0 828 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 PLD3Q8IV08 490 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 TP53INP2Q8IXH6 220 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 TBC1D21Q8IYX1 336 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 FAR1Q8WVX9 515 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 PIK3R3Q92569 461 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 PEX13Q92968 403 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 ROPN1LQ96C74 230 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 SLC30A3Q99726 388 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 REXO4Q9GZR2 422 aaKnown RBP13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 PAK1IP1Q9NWT1 392 aaPredicted RBP13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 ZNF639Q9UID6 485 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 ANAPC2Q9UJX6 822 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 TLK1Q9UKI8 766 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 RUVBL2Q9Y230 463 aaKnown RBP13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 MRPL42Q9Y6G3 142 aaKnown RBP13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 ZNF236Q9UL36 1845 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 THP07101 528 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 CYBAP13498 195 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 IMPDH1P20839 514 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 HOXC8P31273 242 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 GABARAPL2P60520 117 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 CNSTQ6PJW8 725 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 FSTL5Q8N475 847 aaPredicted RBP13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 KCTD4Q8WVF5 259 aa13.89□□□□□ -0.19
GTF3C1-203ENST00000562609 RORBQ92753 470 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms