RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 PIKFYVEQ9Y2I7 2098 aa16.46■□□□□ 0.22
CLK3-207ENST00000562389 RP1P56715 2156 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 FAM237BA0A1B0GVD1 139 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 MAGEB16A2A368 324 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 KLHL33A6NCF5 533 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 SGTAO43765 313 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 NUDT21O43809 227 aaKnown RBP16.45■□□□□ 0.22
CLK3-207ENST00000562389 HYAL3O43820 417 aaPredicted RBP16.45■□□□□ 0.22
CLK3-207ENST00000562389 POP7O75817 140 aaKnown RBP16.45■□□□□ 0.22
CLK3-207ENST00000562389 F3P13726 295 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 SLC2A4P14672 509 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 PNLIPP16233 465 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 PRLHRP49683 370 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 MAZP56270 477 aaKnown RBP16.45■□□□□ 0.22
CLK3-207ENST00000562389 SHC2P98077 582 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 WHAMMP3Q1A5X7 153 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 FASTKD1Q53R41 847 aaKnown RBP16.45■□□□□ 0.22
CLK3-207ENST00000562389 FNBP1LQ5T0N5 605 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 KIAA0930Q6ICG6 404 aaPredicted RBP16.45■□□□□ 0.22
CLK3-207ENST00000562389 HIBCHQ6NVY1 386 aaPredicted RBP16.45■□□□□ 0.22
CLK3-207ENST00000562389 PACS1Q6VY07 963 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 CERS6Q6ZMG9 384 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 DET1Q7L5Y6 550 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 MAATS1Q7Z4T9 603 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 AMZ2Q86W34 360 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 SFRP1Q8N474 314 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 ARL14Q8N4G2 192 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 OR6P1Q8NGX9 317 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 PATE1Q8WXA2 126 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 ZNF592Q92610 1267 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 CCDC74AQ96AQ1 378 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 SGF29Q96ES7 293 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 SNF8Q96H20 258 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 OSGEPL1Q9H4B0 414 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 CATSPERZQ9NTU4 200 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 DNAJC16Q9Y2G8 782 aa16.45■□□□□ 0.22
CLK3-207ENST00000562389 OR5K4A6NMS3 321 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 EFCAB8A8MWE9 144 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 NDC80O14777 642 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 RAD51CO43502 376 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 AP2A2O94973 939 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 SEC31AO94979 1220 aaKnown RBP16.44■□□□□ 0.22
CLK3-207ENST00000562389 EML2O95834 649 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 PAMP19021 973 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 ARNTP27540 789 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 NSG1P42857 185 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 FASLGP48023 281 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 INSM1Q01101 510 aaPredicted RBP16.44■□□□□ 0.22
CLK3-207ENST00000562389 TUBB2AQ13885 445 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 NR1D2Q14995 579 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 AARS2Q5JTZ9 985 aaKnown RBP16.44■□□□□ 0.22
CLK3-207ENST00000562389 CASC4Q6P4E1 433 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 IYDQ6PHW0 289 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 WASH2PQ6VEQ5 465 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 TMPRSS7Q7RTY8 843 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 ZNF438Q7Z4V0 828 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 TMPRSS12Q86WS5 348 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 AGGF1Q8N302 714 aaeCLIP16.44■□□□□ 0.22
CLK3-207ENST00000562389 GALNT15Q8N3T1 639 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 BEND7Q8N7W2 519 aaPredicted RBP16.44■□□□□ 0.22
CLK3-207ENST00000562389 MAPK15Q8TD08 544 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 SLC37A2Q8TED4 501 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 SIGLEC10Q96LC7 697 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 TTC1Q99614 292 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 CCDC3Q9BQI4 270 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 TUBB2BQ9BVA1 445 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 WASH6PQ9NQA3 447 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 PRDM8Q9NQV8 689 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 LRIT1Q9P2V4 623 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 ANAPC5Q9UJX4 755 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 RNF215Q9Y6U7 377 aa16.44■□□□□ 0.22
CLK3-207ENST00000562389 KIR2DS5A0A0G2JLQ3 304 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 A0A0G2JNG1 304 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 FAM221BA6H8Z2 402 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 MGAT4DA6NG13 374 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 KIR2DS3K7RE56 304 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 QSOX1O00391 747 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 OPA1O60313 960 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 SNX2O60749 519 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 TOP3BO95985 862 aaKnown RBP16.43■□□□□ 0.22
CLK3-207ENST00000562389 IDSP22304 550 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 PPARGP37231 505 aaPredicted RBP16.43■□□□□ 0.22
CLK3-207ENST00000562389 ITGA8P53708 1063 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 SEMA3AQ14563 771 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 KIR2DS5Q14953 304 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 DNAJC21Q5F1R6 531 aaKnown RBP16.43■□□□□ 0.22
CLK3-207ENST00000562389 HES3Q5TGS1 186 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 AGAP9Q5VTM2 703 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 CES3Q6UWW8 571 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 TMEM135Q86UB9 458 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 OR2L2Q8NH16 312 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 WDR48Q8TAF3 677 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 NAT14Q8WUY8 206 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 SCNM1Q9BWG6 230 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 TRIM31Q9BZY9 425 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 RABGEF1Q9UJ41 708 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 ANGPTL2Q9UKU9 493 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 NEUROG3Q9Y4Z2 214 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 MRFAP1Q9Y605 127 aa16.43■□□□□ 0.22
CLK3-207ENST00000562389 BPTFQ12830 3046 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms