RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 LOC285095A0A1B0GVY8 99 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 C17orf102A2RUQ5 167 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 UPK1AO00322 258 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 PDHXO00330 501 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 GNGT2O14610 69 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 RPS17P08708 135 aaKnown RBP13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 JAK1P23458 1154 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 GJA5P36382 358 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 IST1P53990 364 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 SELPLGQ14242 412 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 MEP1AQ16819 746 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 UPP1Q16831 310 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 ATP6AP1LQ52LC2 224 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 C6orf136Q5SQH8 315 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 SPATA2LQ8IUW3 424 aaPredicted RBP13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 ABHD11Q8NFV4 315 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 GPR150Q8NGU9 434 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 PROKR1Q8TCW9 393 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 FIG4Q92562 907 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 FUNDC2Q9BWH2 189 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 TDRD1Q9BXT4 1180 aaKnown RBP13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 DERL2Q9GZP9 239 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 ZIM2Q9NZV7 527 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 BAG5Q9UL15 447 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 SNX5Q9Y5X3 404 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 BRCA1P38398 1863 aaKnown RBP13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 WASH4PA8MWX3 477 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 KPNA4O00629 521 aaPredicted RBP13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 GSTA4O15217 222 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 NOBOXO60393 691 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 OR4F21O95013 312 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 MLYCDO95822 493 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 RHOQP17081 205 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 OPRL1P41146 370 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 HALP42357 657 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 RAD23AP54725 363 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 GSTM4Q03013 218 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 SPCS2Q15005 226 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 XKR7Q5GH72 579 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 GTF2IRD2BQ6EKJ0 949 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 MSANTD2Q6P1R3 559 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 TLK2Q86UE8 772 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 GTF2IRD2Q86UP8 949 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 OR56A4Q8NGH8 313 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 FBXO30Q8TB52 745 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 C17orf80Q9BSJ5 609 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 CCDC90BQ9GZT6 254 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 EVLQ9UI08 416 aaPredicted RBP13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 ZNF225Q9UK10 706 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 PDE10AQ9Y233 779 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 B3GNT3Q9Y2A9 372 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 PCDHGA8Q9Y5G5 932 aa13.83□□□□□ -0.2
VPS9D1-202ENST00000561976 PTGES3LE9PB15 166 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 NDUFS3O75489 264 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 POMCP01189 267 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 OGNP20774 298 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 TSPY1Q01534 308 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 ILF2Q12905 390 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 GPRIN3Q6ZVF9 776 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 ZFAND4Q86XD8 727 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 FAM126BQ8IXS8 530 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 GTF3C2Q8WUA4 911 aaPredicted RBP13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 HDAC2Q92769 488 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 FUBP1Q96AE4 644 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 TAMM41Q96BW9 452 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 ABHD8Q96I13 439 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 CDK15Q96Q40 435 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 GPR21Q99679 349 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 FAM118AQ9NWS6 357 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 ST3GAL5Q9UNP4 418 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 PLXNB2O15031 1838 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 LCHNA4D1U4 455 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 XYLBO75191 536 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 BCAS1O75363 584 aaPredicted RBP13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 NPPAP01160 153 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 FGF1P05230 155 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 RPL9P32969 192 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 EIF2B2P49770 351 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 BEX3Q00994 111 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 ACVR1Q04771 509 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 PERM1Q5SV97 790 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 C6orf141Q5SZD1 244 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 OVOS1Q6IE37 1185 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 PIWIL3Q7Z3Z3 882 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 NPLOC4Q8TAT6 608 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 BRSK1Q8TDC3 778 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 NUDT8Q8WV74 236 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 AURKBQ96GD4 344 aaPredicted RBP13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 C1orf74Q96LT6 269 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 ZNF347Q96SE7 839 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 HBEGFQ99075 208 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 CD274Q9NZQ7 290 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 FNIP2Q9P278 1114 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 PCTPQ9UKL6 214 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 TRIM17Q9Y577 477 aa13.82□□□□□ -0.2
VPS9D1-202ENST00000561976 CLDN25C9JDP6 229 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 M0QZ92 97 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 CST1P01037 141 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 HLA-DPA1P20036 260 aa13.81□□□□□ -0.2
VPS9D1-202ENST00000561976 IDUAP35475 653 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms