RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 PRAMEF1O95521 474 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 PRNPP04156 253 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 APODP05090 189 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 C1SP09871 688 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 FGF3P11487 239 aaPredicted RBP7.45□□□□□ -1.22
TPM1-231ENST00000561395 CYP2A6P11509 494 aaPredicted RBP7.45□□□□□ -1.22
TPM1-231ENST00000561395 NEFHP12036 1026 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 HLA-EP13747 358 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 ZNF30P17039 623 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 ITGALP20701 1170 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 CD9P21926 228 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 NFKBIAP25963 317 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 ALDH3A1P30838 453 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 VIPR1P32241 457 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 MMP12P39900 470 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 SLC26A3P40879 764 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 IL12RB1P42701 662 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 PTGER3P43115 390 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 KPNA2P52292 529 aaKnown RBP7.45□□□□□ -1.22
TPM1-231ENST00000561395 ADARP55265 1226 aaKnown RBP7.45□□□□□ -1.22
TPM1-231ENST00000561395 PRSS12P56730 875 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 IRX4P78413 519 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 SEMG2Q02383 582 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 NFATC2Q13469 925 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 ELAVL3Q14576 367 aaKnown RBP7.45□□□□□ -1.22
TPM1-231ENST00000561395 CHI3L2Q15782 390 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 FAM83EQ2M2I3 478 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 PROX2Q3B8N5 592 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 UAP1L1Q3KQV9 507 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 LRRC73Q5JTD7 316 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 LYPLAL1Q5VWZ2 237 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 CES4AQ5XG92 561 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 ATG16L1Q676U5 607 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 LRRC8EQ6NSJ5 796 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 CERS6Q6ZMG9 384 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 DPPA4Q7L190 304 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 PARS2Q7L3T8 475 aaKnown RBP7.45□□□□□ -1.22
TPM1-231ENST00000561395 OTOAQ7RTW8 1153 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 SPATA21Q7Z572 469 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 SNX20Q7Z614 316 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 PIM3Q86V86 326 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 RALGPS2Q86X27 583 aaPredicted RBP7.45□□□□□ -1.22
TPM1-231ENST00000561395 CACNA2D3Q8IZS8 1091 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 STK40Q8N2I9 435 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 CCDC197Q8NCU1 140 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 TMIEQ8NEW7 156 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 OR8D1Q8WZ84 308 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 NXNL1Q96CM4 212 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 GRAMD1AQ96CP6 724 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 UBXN10Q96LJ8 280 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 BIRC8Q96P09 236 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 PLEKHG4BQ96PX9 1271 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 ELAC2Q9BQ52 826 aaKnown RBP7.45□□□□□ -1.22
TPM1-231ENST00000561395 TSSK1BQ9BXA7 367 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 PITPNM3Q9BZ71 974 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 GPAMQ9HCL2 828 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 PCDH12Q9NPG4 1184 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 IL26Q9NPH9 171 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 IGSF5Q9NSI5 407 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 CACNA2D2Q9NY47 1150 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 THAP10Q9P2Z0 257 aaPredicted RBP7.45□□□□□ -1.22
TPM1-231ENST00000561395 APPL1Q9UKG1 709 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 HCN2Q9UL51 889 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 FNDC3AQ9Y2H6 1198 aaKnown RBP7.45□□□□□ -1.22
TPM1-231ENST00000561395 MED16Q9Y2X0 877 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 COMMD10Q9Y6G5 202 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 LRRK1Q38SD2 2015 aa7.45□□□□□ -1.22
TPM1-231ENST00000561395 SPAARA0A1B0GVQ0 90 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 C16orf96A6NNT2 1141 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 AGAP14A8MT82 685 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 A8MX80 341 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 TARM1B6A8C7 271 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 TK2O00142 265 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 KPNA3O00505 521 aaPredicted RBP7.44□□□□□ -1.22
TPM1-231ENST00000561395 EBAG9O00559 213 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 KHNYNO15037 678 aaKnown RBP7.44□□□□□ -1.22
TPM1-231ENST00000561395 OR1I1O60431 355 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 H2AFYO75367 372 aaKnown RBP7.44□□□□□ -1.22
TPM1-231ENST00000561395 ESR1P03372 595 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 SERPINE1P05121 402 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 LTA4HP09960 611 aaKnown RBP7.44□□□□□ -1.22
TPM1-231ENST00000561395 SBK3P0C264 359 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 CCDC166P0CW27 439 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 MYL2P10916 166 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 PKMP14618 531 aaKnown RBP7.44□□□□□ -1.22
TPM1-231ENST00000561395 HNRNPLP14866 589 aaKnown RBP eCLIP7.44□□□□□ -1.22
TPM1-231ENST00000561395 CPA3P15088 417 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 ZNF37AP17032 561 aaPredicted RBP7.44□□□□□ -1.22
TPM1-231ENST00000561395 XPAP23025 273 aaPredicted RBP7.44□□□□□ -1.22
TPM1-231ENST00000561395 RPS3P23396 243 aaKnown RBP eCLIP7.44□□□□□ -1.22
TPM1-231ENST00000561395 ITGB7P26010 798 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 ACRV1P26436 265 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 FMO4P31512 558 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 CA5AP35218 305 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 PPARGP37231 505 aaPredicted RBP7.44□□□□□ -1.22
TPM1-231ENST00000561395 DPP6P42658 865 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 GLRBP48167 497 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 SPINT3P49223 89 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 DCDC1P59894 354 aa7.44□□□□□ -1.22
TPM1-231ENST00000561395 OCRLQ01968 901 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms