RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 PAFAH1B3Q15102 231 aaKnown RBP18.18■□□□□ 0.5
TPM1-226ENST00000560959 IFI16Q16666 785 aaKnown RBP18.18■□□□□ 0.5
TPM1-226ENST00000560959 SLC6A19Q695T7 634 aa18.18■□□□□ 0.5
TPM1-226ENST00000560959 CRTC3Q6UUV7 619 aa18.18■□□□□ 0.5
TPM1-226ENST00000560959 ZNF547Q8IVP9 402 aa18.18■□□□□ 0.5
TPM1-226ENST00000560959 SLC34A3Q8N130 599 aa18.18■□□□□ 0.5
TPM1-226ENST00000560959 RBMXL3Q8N7X1 1067 aaKnown RBP18.18■□□□□ 0.5
TPM1-226ENST00000560959 NIPA2Q8N8Q9 360 aa18.18■□□□□ 0.5
TPM1-226ENST00000560959 TMEM102Q8N9M5 508 aaPredicted RBP18.18■□□□□ 0.5
TPM1-226ENST00000560959 GLIS1Q8NBF1 620 aa18.18■□□□□ 0.5
TPM1-226ENST00000560959 TCTN2Q96GX1 697 aa18.18■□□□□ 0.5
TPM1-226ENST00000560959 NUP85Q9BW27 656 aa18.18■□□□□ 0.5
TPM1-226ENST00000560959 XPO4Q9C0E2 1151 aaKnown RBP18.18■□□□□ 0.5
TPM1-226ENST00000560959 FGF21Q9NSA1 209 aa18.18■□□□□ 0.5
TPM1-226ENST00000560959 TMEM63CQ9P1W3 806 aa18.18■□□□□ 0.5
TPM1-226ENST00000560959 SLC5A6Q9Y289 635 aa18.18■□□□□ 0.5
TPM1-226ENST00000560959 TNRC6AQ8NDV7 1962 aaKnown RBP18.17■□□□□ 0.5
TPM1-226ENST00000560959 OR52A4PA6NMU1 304 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 CBX6O95503 412 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 KLK3P07288 261 aaPredicted RBP18.17■□□□□ 0.5
TPM1-226ENST00000560959 VCLP18206 1134 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 RPL10P27635 214 aaKnown RBP18.17■□□□□ 0.5
TPM1-226ENST00000560959 TNFRSF8P28908 595 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 PTGIRP43119 386 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 TUBB4BP68371 445 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 HSD11B2P80365 405 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 TUBB2AQ13885 445 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 SEPT7Q16181 437 aaKnown RBP18.17■□□□□ 0.5
TPM1-226ENST00000560959 PRR30Q53SZ7 412 aaPredicted RBP18.17■□□□□ 0.5
TPM1-226ENST00000560959 ZNF648Q5T619 568 aaPredicted RBP18.17■□□□□ 0.5
TPM1-226ENST00000560959 MED25Q71SY5 747 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 TMC3Q7Z5M5 1100 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 CARFQ8N187 725 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 D2HGDHQ8N465 521 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 GPR26Q8NDV2 337 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 FDCSPQ8NFU4 85 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 ZNF653Q96CK0 615 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 SMAD5Q99717 465 aaKnown RBP18.17■□□□□ 0.5
TPM1-226ENST00000560959 TUBB2BQ9BVA1 445 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 ARFGAP3Q9NP61 516 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 LATS2Q9NRM7 1088 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 KCND1Q9NSA2 647 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 C5AR2Q9P296 337 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 DNAJC16Q9Y2G8 782 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 ZNF106Q9H2Y7 1883 aaKnown RBP18.17■□□□□ 0.5
TPM1-226ENST00000560959 ABCA12Q86UK0 2595 aa18.17■□□□□ 0.5
TPM1-226ENST00000560959 TMEM63AO94886 807 aa18.16■□□□□ 0.5
TPM1-226ENST00000560959 CDK14O94921 469 aa18.16■□□□□ 0.5
TPM1-226ENST00000560959 HALP42357 657 aa18.16■□□□□ 0.5
TPM1-226ENST00000560959 GSDMDP57764 484 aa18.16■□□□□ 0.5
TPM1-226ENST00000560959 SLC25A11Q02978 314 aaKnown RBP18.16■□□□□ 0.5
TPM1-226ENST00000560959 KCNAB1Q14722 419 aa18.16■□□□□ 0.5
TPM1-226ENST00000560959 ZRANB3Q5FWF4 1079 aa18.16■□□□□ 0.5
TPM1-226ENST00000560959 CCDC183Q5T5S1 534 aa18.16■□□□□ 0.5
TPM1-226ENST00000560959 TXNRD3NBQ6F5E7 133 aa18.16■□□□□ 0.5
TPM1-226ENST00000560959 C11orf96Q7Z7L8 435 aa18.16■□□□□ 0.5
TPM1-226ENST00000560959 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.16■□□□□ 0.5
TPM1-226ENST00000560959 TTC13Q8NBP0 860 aa18.16■□□□□ 0.5
TPM1-226ENST00000560959 MR1Q95460 341 aa18.16■□□□□ 0.5
TPM1-226ENST00000560959 C5orf34Q96MH7 638 aa18.16■□□□□ 0.5
TPM1-226ENST00000560959 NLNQ9BYT8 704 aa18.16■□□□□ 0.5
TPM1-226ENST00000560959 ISCUQ9H1K1 167 aa18.16■□□□□ 0.5
TPM1-226ENST00000560959 HAUS4Q9H6D7 363 aa18.16■□□□□ 0.5
TPM1-226ENST00000560959 MAGEE1Q9HCI5 957 aa18.16■□□□□ 0.5
TPM1-226ENST00000560959 DTLQ9NZJ0 730 aa18.16■□□□□ 0.5
TPM1-226ENST00000560959 TLCD2A6NGC4 264 aa18.15■□□□□ 0.5
TPM1-226ENST00000560959 MFSD11O43934 449 aa18.15■□□□□ 0.5
TPM1-226ENST00000560959 SCRG1O75711 98 aa18.15■□□□□ 0.5
TPM1-226ENST00000560959 HLA-DQB2P05538 268 aa18.15■□□□□ 0.5
TPM1-226ENST00000560959 MMP2P08253 660 aa18.15■□□□□ 0.5
TPM1-226ENST00000560959 EBLN1P0CF75 366 aa18.15■□□□□ 0.5
TPM1-226ENST00000560959 ELAVL4P26378 380 aaKnown RBP18.15■□□□□ 0.5
TPM1-226ENST00000560959 ARL4DP49703 201 aa18.15■□□□□ 0.5
TPM1-226ENST00000560959 RRADP55042 308 aa18.15■□□□□ 0.5
TPM1-226ENST00000560959 KRT81Q14533 505 aa18.15■□□□□ 0.5
TPM1-226ENST00000560959 PLA2G4EQ3MJ16 856 aa18.15■□□□□ 0.5
TPM1-226ENST00000560959 SNRNP40Q96DI7 357 aaKnown RBP18.15■□□□□ 0.5
TPM1-226ENST00000560959 VPS35Q96QK1 796 aa18.15■□□□□ 0.5
TPM1-226ENST00000560959 MAP3K3Q99759 626 aa18.15■□□□□ 0.5
TPM1-226ENST00000560959 NUDT9Q9BW91 350 aa18.15■□□□□ 0.5
TPM1-226ENST00000560959 GPR83Q9NYM4 423 aa18.15■□□□□ 0.5
TPM1-226ENST00000560959 AIPL1Q9NZN9 384 aa18.15■□□□□ 0.5
TPM1-226ENST00000560959 MYO1AQ9UBC5 1043 aa18.15■□□□□ 0.5
TPM1-226ENST00000560959 TTLL3Q9Y4R7 772 aa18.15■□□□□ 0.5
TPM1-226ENST00000560959 DDX3XO00571 662 aaKnown RBP eCLIP18.14■□□□□ 0.491e-11■■■■□ 19.9
TPM1-226ENST00000560959 MX2P20592 715 aa18.14■□□□□ 0.49
TPM1-226ENST00000560959 PRKCIP41743 596 aa18.14■□□□□ 0.49
TPM1-226ENST00000560959 VAV2P52735 878 aa18.14■□□□□ 0.49
TPM1-226ENST00000560959 DRG2P55039 364 aaKnown RBP18.14■□□□□ 0.49
TPM1-226ENST00000560959 PPP1CAP62136 330 aa18.14■□□□□ 0.49
TPM1-226ENST00000560959 GPS2Q13227 327 aa18.14■□□□□ 0.49
TPM1-226ENST00000560959 C1QL3Q5VWW1 255 aa18.14■□□□□ 0.49
TPM1-226ENST00000560959 NCBP2-AS2Q69YL0 99 aa18.14■□□□□ 0.49
TPM1-226ENST00000560959 APTXQ7Z2E3 356 aaKnown RBP18.14■□□□□ 0.49
TPM1-226ENST00000560959 ZNF571Q7Z3V5 609 aaPredicted RBP18.14■□□□□ 0.49
TPM1-226ENST00000560959 TMEM126BQ8IUX1 230 aa18.14■□□□□ 0.49
TPM1-226ENST00000560959 IQCKQ8N0W5 287 aa18.14■□□□□ 0.49
TPM1-226ENST00000560959 BRSK1Q8TDC3 778 aa18.14■□□□□ 0.49
TPM1-226ENST00000560959 ZNF501Q96CX3 271 aaPredicted RBP18.14■□□□□ 0.49
TPM1-226ENST00000560959 MFRPQ9BY79 579 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms